Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFNA1P01562 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFNA1P01562 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.22■□□□□ 0.67
IFNA1P01562 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IFNA1P01562 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFNA1P01562 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
IFNA1P01562 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFNA1P01562 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.21■□□□□ 0.67
IFNA1P01562 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
IFNA1P01562 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFNA1P01562 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFNA1P01562 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IFNA1P01562 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
IFNA1P01562 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFNA1P01562 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFNA1P01562 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IFNA1P01562 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFNA1P01562 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFNA1P01562 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IFNA1P01562 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
IFNA1P01562 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
IFNA1P01562 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFNA1P01562 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFNA1P01562 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFNA1P01562 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IFNA1P01562 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IFNA1P01562 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.18■□□□□ 0.66
IFNA1P01562 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNA1P01562 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNA1P01562 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.18■□□□□ 0.66
IFNA1P01562 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNA1P01562 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNA1P01562 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNA1P01562 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNA1P01562 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
IFNA1P01562 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IFNA1P01562 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNA1P01562 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFNA1P01562 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
IFNA1P01562 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFNA1P01562 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFNA1P01562 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFNA1P01562 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
IFNA1P01562 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 LINC00543-201ENST00000567234 1845 ntBASIC19.16■□□□□ 0.66
IFNA1P01562 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNA1P01562 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNA1P01562 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNA1P01562 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNA1P01562 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
IFNA1P01562 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.15■□□□□ 0.66
IFNA1P01562 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNA1P01562 AC142472.1-201ENST00000612013 1741 ntBASIC19.15■□□□□ 0.66
IFNA1P01562 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNA1P01562 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNA1P01562 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNA1P01562 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.15■□□□□ 0.66
IFNA1P01562 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNA1P01562 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
IFNA1P01562 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
IFNA1P01562 AC010501.1-201ENST00000606270 1962 ntBASIC19.14■□□□□ 0.65
IFNA1P01562 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
IFNA1P01562 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNA1P01562 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNA1P01562 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IFNA1P01562 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
IFNA1P01562 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IFNA1P01562 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNA1P01562 AC138932.3-201ENST00000567634 1902 ntBASIC19.13■□□□□ 0.65
IFNA1P01562 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNA1P01562 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNA1P01562 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNA1P01562 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNA1P01562 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNA1P01562 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNA1P01562 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNA1P01562 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNA1P01562 AC022211.4-201ENST00000625094 2161 ntBASIC19.12■□□□□ 0.65
IFNA1P01562 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.12■□□□□ 0.65
IFNA1P01562 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNA1P01562 WHAMMP3-201ENST00000611636 1609 ntBASIC19.12■□□□□ 0.65
IFNA1P01562 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
IFNA1P01562 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNA1P01562 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.11■□□□□ 0.65
IFNA1P01562 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFNA1P01562 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.11■□□□□ 0.65
IFNA1P01562 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.11■□□□□ 0.65
IFNA1P01562 AC079834.2-201ENST00000609776 1949 ntBASIC19.11■□□□□ 0.65
IFNA1P01562 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFNA1P01562 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
IFNA1P01562 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.1■□□□□ 0.65
IFNA1P01562 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
IFNA1P01562 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFNA1P01562 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms