Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.52■■■□□ 2
PGK1P00558 AC019171.1-201ENST00000601251 1056 ntBASIC27.52■■■□□ 2
PGK1P00558 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.52■■■□□ 2
PGK1P00558 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
PGK1P00558 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
PGK1P00558 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.51■■□□□ 1.99
PGK1P00558 AC087393.1-201ENST00000582896 145 ntBASIC27.51■■□□□ 1.99
PGK1P00558 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
PGK1P00558 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PGK1P00558 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PGK1P00558 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PGK1P00558 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PGK1P00558 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PGK1P00558 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PGK1P00558 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.5■■□□□ 1.99
PGK1P00558 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.5■■□□□ 1.99
PGK1P00558 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
PGK1P00558 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PGK1P00558 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PGK1P00558 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PGK1P00558 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.49■■□□□ 1.99
PGK1P00558 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PGK1P00558 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
PGK1P00558 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.48■■□□□ 1.99
PGK1P00558 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PGK1P00558 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PGK1P00558 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PGK1P00558 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.47■■□□□ 1.99
PGK1P00558 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PGK1P00558 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PGK1P00558 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
PGK1P00558 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.46■■□□□ 1.99
PGK1P00558 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.46■■□□□ 1.99
PGK1P00558 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.46■■□□□ 1.99
PGK1P00558 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PGK1P00558 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.45■■□□□ 1.99
PGK1P00558 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PGK1P00558 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.45■■□□□ 1.99
PGK1P00558 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
PGK1P00558 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.45■■□□□ 1.98
PGK1P00558 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.44■■□□□ 1.98
PGK1P00558 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PGK1P00558 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PGK1P00558 RPS2P7-201ENST00000447334 885 ntBASIC27.44■■□□□ 1.98
PGK1P00558 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PGK1P00558 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
PGK1P00558 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.43■■□□□ 1.98
PGK1P00558 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PGK1P00558 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PGK1P00558 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PGK1P00558 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PGK1P00558 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.43■■□□□ 1.98
PGK1P00558 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.43■■□□□ 1.98
PGK1P00558 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PGK1P00558 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PGK1P00558 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
PGK1P00558 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
PGK1P00558 LONRF2P2-201ENST00000439212 571 ntBASIC27.42■■□□□ 1.98
PGK1P00558 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PGK1P00558 ABCB10P1-201ENST00000614297 2181 ntBASIC27.42■■□□□ 1.98
PGK1P00558 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
PGK1P00558 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PGK1P00558 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PGK1P00558 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
PGK1P00558 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PGK1P00558 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PGK1P00558 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PGK1P00558 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PGK1P00558 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PGK1P00558 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.4■■□□□ 1.98
PGK1P00558 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.4■■□□□ 1.98
PGK1P00558 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.4■■□□□ 1.98
PGK1P00558 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
PGK1P00558 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PGK1P00558 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
PGK1P00558 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.39■■□□□ 1.98
PGK1P00558 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PGK1P00558 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.39■■□□□ 1.98
PGK1P00558 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.38■■□□□ 1.97
PGK1P00558 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PGK1P00558 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.38■■□□□ 1.97
PGK1P00558 Z92544.1-202ENST00000571933 1220 ntBASIC27.38■■□□□ 1.97
PGK1P00558 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.38■■□□□ 1.97
PGK1P00558 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PGK1P00558 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PGK1P00558 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PGK1P00558 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.37■■□□□ 1.97
PGK1P00558 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
PGK1P00558 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PGK1P00558 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PGK1P00558 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
PGK1P00558 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PGK1P00558 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PGK1P00558 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.36■■□□□ 1.97
PGK1P00558 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.36■■□□□ 1.97
PGK1P00558 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PGK1P00558 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
PGK1P00558 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PGK1P00558 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.35■■□□□ 1.97
PGK1P00558 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms