Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM4BO94953 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.13■□□□□ 0.97
KDM4BO94953 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.13■□□□□ 0.97
KDM4BO94953 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM4BO94953 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM4BO94953 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.12■□□□□ 0.97
KDM4BO94953 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDM4BO94953 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KDM4BO94953 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
KDM4BO94953 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
KDM4BO94953 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
KDM4BO94953 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KDM4BO94953 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
KDM4BO94953 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM4BO94953 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM4BO94953 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM4BO94953 LINC01971-201ENST00000617888 1048 ntBASIC21.1■□□□□ 0.97
KDM4BO94953 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM4BO94953 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDM4BO94953 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.1■□□□□ 0.97
KDM4BO94953 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.1■□□□□ 0.97
KDM4BO94953 AC142472.1-201ENST00000612013 1741 ntBASIC21.09■□□□□ 0.97
KDM4BO94953 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.09■□□□□ 0.97
KDM4BO94953 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM4BO94953 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM4BO94953 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM4BO94953 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM4BO94953 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KDM4BO94953 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.08■□□□□ 0.97
KDM4BO94953 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.07■□□□□ 0.96
KDM4BO94953 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM4BO94953 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KDM4BO94953 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
KDM4BO94953 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KDM4BO94953 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 ERN1-208ENST00000606895 2068 ntBASIC21.06■□□□□ 0.96
KDM4BO94953 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KDM4BO94953 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
KDM4BO94953 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KDM4BO94953 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KDM4BO94953 WHAMMP3-201ENST00000611636 1609 ntBASIC21.04■□□□□ 0.96
KDM4BO94953 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.04■□□□□ 0.96
KDM4BO94953 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.04■□□□□ 0.96
KDM4BO94953 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM4BO94953 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.03■□□□□ 0.96
KDM4BO94953 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KDM4BO94953 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L13-201ENST00000554103 1267 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L15-201ENST00000611059 1267 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L23-201ENST00000615195 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L24-201ENST00000617576 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L22-201ENST00000618238 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L20-201ENST00000619712 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L21-201ENST00000622058 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L10-201ENST00000622460 1267 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 DUX4L25-201ENST00000624915 1269 ntBASIC21.02■□□□□ 0.96
KDM4BO94953 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KDM4BO94953 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM4BO94953 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.02■□□□□ 0.95
KDM4BO94953 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4BO94953 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4BO94953 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM4BO94953 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KDM4BO94953 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.01■□□□□ 0.95
KDM4BO94953 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
KDM4BO94953 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21■□□□□ 0.95
KDM4BO94953 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21■□□□□ 0.95
KDM4BO94953 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KDM4BO94953 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4BO94953 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4BO94953 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.99■□□□□ 0.95
KDM4BO94953 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.99■□□□□ 0.95
KDM4BO94953 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KDM4BO94953 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KDM4BO94953 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDM4BO94953 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms