Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM3O75382 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
TRIM3O75382 AC025884.2-201ENST00000553429 711 ntBASIC22.54■■□□□ 1.2
TRIM3O75382 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM3O75382 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM3O75382 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM3O75382 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM3O75382 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM3O75382 SMPD5-203ENST00000639008 1464 ntBASIC22.54■■□□□ 1.2
TRIM3O75382 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRIM3O75382 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM3O75382 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
TRIM3O75382 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM3O75382 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM3O75382 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM3O75382 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM3O75382 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM3O75382 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.51■■□□□ 1.19
TRIM3O75382 AC007029.1-201ENST00000604183 313 ntBASIC22.51■■□□□ 1.19
TRIM3O75382 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TRIM3O75382 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.51■■□□□ 1.19
TRIM3O75382 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM3O75382 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TRIM3O75382 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM3O75382 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM3O75382 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM3O75382 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM3O75382 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM3O75382 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.5■■□□□ 1.19
TRIM3O75382 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM3O75382 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM3O75382 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM3O75382 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM3O75382 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM3O75382 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM3O75382 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM3O75382 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM3O75382 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM3O75382 NTF6A-201ENST00000591175 560 ntBASIC22.49■■□□□ 1.19
TRIM3O75382 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM3O75382 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
TRIM3O75382 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
TRIM3O75382 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM3O75382 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TRIM3O75382 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM3O75382 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM3O75382 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
TRIM3O75382 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM3O75382 AL359504.2-201ENST00000605506 1601 ntBASIC22.47■■□□□ 1.19
TRIM3O75382 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM3O75382 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
TRIM3O75382 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM3O75382 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM3O75382 AL449106.1-201ENST00000608517 1980 ntBASIC22.47■■□□□ 1.19
TRIM3O75382 U85056.1-201ENST00000616429 682 ntBASIC22.46■■□□□ 1.19
TRIM3O75382 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM3O75382 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
TRIM3O75382 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TRIM3O75382 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.45■■□□□ 1.18
TRIM3O75382 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM3O75382 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM3O75382 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM3O75382 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM3O75382 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
TRIM3O75382 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
TRIM3O75382 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM3O75382 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM3O75382 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM3O75382 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.43■■□□□ 1.18
TRIM3O75382 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM3O75382 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TRIM3O75382 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TRIM3O75382 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM3O75382 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM3O75382 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TRIM3O75382 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM3O75382 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM3O75382 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM3O75382 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM3O75382 RP9P-202ENST00000450133 1212 ntBASIC22.41■■□□□ 1.18
TRIM3O75382 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM3O75382 MIR3960-201ENST00000583311 91 ntBASIC22.41■■□□□ 1.18
TRIM3O75382 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM3O75382 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM3O75382 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM3O75382 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM3O75382 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM3O75382 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM3O75382 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM3O75382 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM3O75382 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM3O75382 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM3O75382 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM3O75382 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM3O75382 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
TRIM3O75382 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM3O75382 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
TRIM3O75382 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM3O75382 AC009831.1-201ENST00000580420 1582 ntBASIC22.38■■□□□ 1.17
TRIM3O75382 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms