Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 AC060814.1-201ENST00000554326 538 ntBASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB13A6NJU9 AL157400.5-201ENST00000507624 621 ntBASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPB13A6NJU9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPB13A6NJU9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.67■■□□□ 1.06
NPIPB13A6NJU9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.67■■□□□ 1.06
NPIPB13A6NJU9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.67■■□□□ 1.06
NPIPB13A6NJU9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.67■■□□□ 1.06
NPIPB13A6NJU9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPB13A6NJU9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB13A6NJU9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB13A6NJU9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPB13A6NJU9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB13A6NJU9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB13A6NJU9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NPIPB13A6NJU9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPB13A6NJU9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 AC025884.2-201ENST00000553429 711 ntBASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 AC092296.2-201ENST00000589470 999 ntBASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPB13A6NJU9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB13A6NJU9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.63■■□□□ 1.05
NPIPB13A6NJU9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB13A6NJU9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB13A6NJU9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPIPB13A6NJU9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPIPB13A6NJU9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.62■■□□□ 1.05
NPIPB13A6NJU9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.62■■□□□ 1.05
NPIPB13A6NJU9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 ERN1-208ENST00000606895 2068 ntBASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 MIR4449-201ENST00000578365 66 ntBASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPB13A6NJU9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.6■■□□□ 1.05
NPIPB13A6NJU9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPB13A6NJU9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPB13A6NJU9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.6■■□□□ 1.05
NPIPB13A6NJU9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
NPIPB13A6NJU9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPB13A6NJU9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPB13A6NJU9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPB13A6NJU9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.59■■□□□ 1.05
NPIPB13A6NJU9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPB13A6NJU9 ECEL1P2-201ENST00000461596 1295 ntBASIC21.58■■□□□ 1.05
NPIPB13A6NJU9 MIR3960-201ENST00000583311 91 ntBASIC21.58■■□□□ 1.05
NPIPB13A6NJU9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPB13A6NJU9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPB13A6NJU9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.58■■□□□ 1.05
NPIPB13A6NJU9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPIPB13A6NJU9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.58■■□□□ 1.04
NPIPB13A6NJU9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB13A6NJU9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB13A6NJU9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB13A6NJU9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB13A6NJU9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NPIPB13A6NJU9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NPIPB13A6NJU9 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.56■■□□□ 1.04
NPIPB13A6NJU9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPB13A6NJU9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPB13A6NJU9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.56■■□□□ 1.04
NPIPB13A6NJU9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.55■■□□□ 1.04
NPIPB13A6NJU9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms