Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRCOL1A6NCL2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRCOL1A6NCL2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 AL449106.1-201ENST00000608517 1980 ntBASIC16.2■□□□□ 0.18
LRCOL1A6NCL2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 BX255925.1-201ENST00000566954 1854 ntBASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRCOL1A6NCL2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 AC142086.6-201ENST00000621154 1765 ntBASIC16.18■□□□□ 0.18
LRCOL1A6NCL2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCOL1A6NCL2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCOL1A6NCL2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LRCOL1A6NCL2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCOL1A6NCL2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.17■□□□□ 0.18
LRCOL1A6NCL2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCOL1A6NCL2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRCOL1A6NCL2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCOL1A6NCL2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.15■□□□□ 0.18
LRCOL1A6NCL2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCOL1A6NCL2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 DUX4L9-201ENST00000449051 1259 ntBASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCOL1A6NCL2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 SPCS2P3-201ENST00000500401 656 ntBASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 DUX4L18-201ENST00000553347 1267 ntBASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCOL1A6NCL2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCOL1A6NCL2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCOL1A6NCL2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCOL1A6NCL2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCOL1A6NCL2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
LRCOL1A6NCL2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRCOL1A6NCL2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRCOL1A6NCL2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRCOL1A6NCL2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRCOL1A6NCL2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms