Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SMIM35A0A1B0GVV1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.97■■□□□ 1.91
SMIM35A0A1B0GVV1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.96■■□□□ 1.91
SMIM35A0A1B0GVV1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.96■■□□□ 1.91
SMIM35A0A1B0GVV1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMIM35A0A1B0GVV1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.96■■□□□ 1.91
SMIM35A0A1B0GVV1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMIM35A0A1B0GVV1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.95■■□□□ 1.9
SMIM35A0A1B0GVV1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMIM35A0A1B0GVV1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.95■■□□□ 1.9
SMIM35A0A1B0GVV1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.95■■□□□ 1.9
SMIM35A0A1B0GVV1 BX255925.1-201ENST00000566954 1854 ntBASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 PVT1_1.1-201ENST00000615125 194 ntBASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMIM35A0A1B0GVV1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMIM35A0A1B0GVV1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SMIM35A0A1B0GVV1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.92■■□□□ 1.9
SMIM35A0A1B0GVV1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
SMIM35A0A1B0GVV1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.92■■□□□ 1.9
SMIM35A0A1B0GVV1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SMIM35A0A1B0GVV1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.92■■□□□ 1.9
SMIM35A0A1B0GVV1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMIM35A0A1B0GVV1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMIM35A0A1B0GVV1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
SMIM35A0A1B0GVV1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SMIM35A0A1B0GVV1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.91■■□□□ 1.9
SMIM35A0A1B0GVV1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 AL451085.2-201ENST00000605085 799 ntBASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 KRT8P33-201ENST00000508125 1423 ntBASIC26.9■■□□□ 1.9
SMIM35A0A1B0GVV1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SMIM35A0A1B0GVV1 AC103834.1-201ENST00000520383 144 ntBASIC26.89■■□□□ 1.9
SMIM35A0A1B0GVV1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.89■■□□□ 1.9
SMIM35A0A1B0GVV1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.88■■□□□ 1.89
SMIM35A0A1B0GVV1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMIM35A0A1B0GVV1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMIM35A0A1B0GVV1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SMIM35A0A1B0GVV1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.88■■□□□ 1.89
SMIM35A0A1B0GVV1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
SMIM35A0A1B0GVV1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMIM35A0A1B0GVV1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.87■■□□□ 1.89
SMIM35A0A1B0GVV1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMIM35A0A1B0GVV1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.87■■□□□ 1.89
SMIM35A0A1B0GVV1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMIM35A0A1B0GVV1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.87■■□□□ 1.89
SMIM35A0A1B0GVV1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 YBX1P4-201ENST00000392794 808 ntBASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 AL035685.1-201ENST00000636663 812 ntBASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMIM35A0A1B0GVV1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SMIM35A0A1B0GVV1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SMIM35A0A1B0GVV1 AC087393.1-201ENST00000582896 145 ntBASIC26.85■■□□□ 1.89
SMIM35A0A1B0GVV1 MIR4508-201ENST00000584178 70 ntBASIC26.85■■□□□ 1.89
SMIM35A0A1B0GVV1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMIM35A0A1B0GVV1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SMIM35A0A1B0GVV1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMIM35A0A1B0GVV1 AC142472.1-201ENST00000612013 1741 ntBASIC26.84■■□□□ 1.89
SMIM35A0A1B0GVV1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
SMIM35A0A1B0GVV1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMIM35A0A1B0GVV1 AC019171.1-201ENST00000601251 1056 ntBASIC26.82■■□□□ 1.88
SMIM35A0A1B0GVV1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SMIM35A0A1B0GVV1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
SMIM35A0A1B0GVV1 RPS2P7-201ENST00000447334 885 ntBASIC26.81■■□□□ 1.88
SMIM35A0A1B0GVV1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMIM35A0A1B0GVV1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMIM35A0A1B0GVV1 AC142086.6-201ENST00000621154 1765 ntBASIC26.81■■□□□ 1.88
SMIM35A0A1B0GVV1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms