Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C13orf42A0A1B0GVH6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
C13orf42A0A1B0GVH6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.37■□□□□ 0.85
C13orf42A0A1B0GVH6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
C13orf42A0A1B0GVH6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C13orf42A0A1B0GVH6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C13orf42A0A1B0GVH6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.36■□□□□ 0.85
C13orf42A0A1B0GVH6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C13orf42A0A1B0GVH6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C13orf42A0A1B0GVH6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
C13orf42A0A1B0GVH6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C13orf42A0A1B0GVH6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C13orf42A0A1B0GVH6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.34■□□□□ 0.85
C13orf42A0A1B0GVH6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
C13orf42A0A1B0GVH6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C13orf42A0A1B0GVH6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C13orf42A0A1B0GVH6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
C13orf42A0A1B0GVH6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C13orf42A0A1B0GVH6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
C13orf42A0A1B0GVH6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
C13orf42A0A1B0GVH6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.33■□□□□ 0.85
C13orf42A0A1B0GVH6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C13orf42A0A1B0GVH6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
C13orf42A0A1B0GVH6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 MIR6090-201ENST00000622481 60 ntBASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C13orf42A0A1B0GVH6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C13orf42A0A1B0GVH6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C13orf42A0A1B0GVH6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
C13orf42A0A1B0GVH6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C13orf42A0A1B0GVH6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C13orf42A0A1B0GVH6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C13orf42A0A1B0GVH6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C13orf42A0A1B0GVH6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
C13orf42A0A1B0GVH6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
C13orf42A0A1B0GVH6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C13orf42A0A1B0GVH6 AC142381.3-201ENST00000568208 1670 ntBASIC20.29■□□□□ 0.84
C13orf42A0A1B0GVH6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C13orf42A0A1B0GVH6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
C13orf42A0A1B0GVH6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C13orf42A0A1B0GVH6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C13orf42A0A1B0GVH6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
C13orf42A0A1B0GVH6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
C13orf42A0A1B0GVH6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
C13orf42A0A1B0GVH6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
C13orf42A0A1B0GVH6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.27■□□□□ 0.83
C13orf42A0A1B0GVH6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 AC133561.1-201ENST00000568600 2415 ntBASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C13orf42A0A1B0GVH6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C13orf42A0A1B0GVH6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 AC135983.2-203ENST00000454486 1613 ntBASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
C13orf42A0A1B0GVH6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms