Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 AC006058.3-201ENST00000606217 1069 ntBASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 AC010240.3-201ENST00000607688 395 ntBASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.72■□□□□ 0.43
ANKRD42Q8N9B4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 LYSMD4-203ENST00000378904 2122 ntBASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 AP003041.3-201ENST00000527151 707 ntBASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 AC016396.2-201ENST00000562575 1417 ntBASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ANKRD42Q8N9B4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ANKRD42Q8N9B4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ANKRD42Q8N9B4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ANKRD42Q8N9B4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
ANKRD42Q8N9B4 AC116353.5-201ENST00000638148 1699 ntBASIC17.71■□□□□ 0.42
ANKRD42Q8N9B4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 WWOX-216ENST00000569818 525 ntBASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 CD177P1-201ENST00000606252 935 ntBASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ANKRD42Q8N9B4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ANKRD42Q8N9B4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms