Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 BCAR1-209ENST00000546196 1340 ntBASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 AC046185.3-201ENST00000623228 1824 ntBASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 AL031432.2-201ENST00000566714 459 ntBASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 AL928711.1-201ENST00000570165 459 ntBASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 PI4KAP1-204ENST00000612579 1703 ntBASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHROOM1Q2M3G4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 AL355385.1-201ENST00000606123 409 ntBASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 AC025580.3-201ENST00000617932 1424 ntBASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHROOM1Q2M3G4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 NEFHP1-201ENST00000412845 2629 ntBASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 PDPK2P-202ENST00000562415 1191 ntBASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 C20orf181-201ENST00000623918 480 ntBASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHROOM1Q2M3G4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHROOM1Q2M3G4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHROOM1Q2M3G4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHROOM1Q2M3G4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHROOM1Q2M3G4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHROOM1Q2M3G4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHROOM1Q2M3G4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHROOM1Q2M3G4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms