Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 CXCL1P1-201ENST00000502804 216 ntBASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 AC093028.1-201ENST00000622998 982 ntBASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC187A0A096LP49 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 ACTG1P4-201ENST00000425123 1122 ntBASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 AC004449.1-201ENST00000564240 433 ntBASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 AC068137.2-201ENST00000605408 478 ntBASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 AC100803.2-201ENST00000562459 1963 ntBASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC187A0A096LP49 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms