Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SGCDQ92629 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.09■□□□□ 0.17
SGCDQ92629 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SGCDQ92629 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.09■□□□□ 0.17
SGCDQ92629 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.09■□□□□ 0.17
SGCDQ92629 MIR3180-5-201ENST00000583743 153 ntBASIC16.09■□□□□ 0.17
SGCDQ92629 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.09■□□□□ 0.17
SGCDQ92629 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.09■□□□□ 0.17
SGCDQ92629 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SGCDQ92629 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SGCDQ92629 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGCDQ92629 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SGCDQ92629 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.09■□□□□ 0.17
SGCDQ92629 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SGCDQ92629 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SGCDQ92629 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
SGCDQ92629 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SGCDQ92629 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SGCDQ92629 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.08■□□□□ 0.17
SGCDQ92629 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SGCDQ92629 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SGCDQ92629 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SGCDQ92629 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.08■□□□□ 0.17
SGCDQ92629 AC092053.1-201ENST00000605787 1936 ntBASIC16.08■□□□□ 0.16
SGCDQ92629 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.08■□□□□ 0.16
SGCDQ92629 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SGCDQ92629 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 AL158047.1-201ENST00000445918 881 ntBASIC16.08■□□□□ 0.16
SGCDQ92629 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.08■□□□□ 0.16
SGCDQ92629 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.08■□□□□ 0.16
SGCDQ92629 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SGCDQ92629 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.08■□□□□ 0.16
SGCDQ92629 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.08■□□□□ 0.16
SGCDQ92629 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.08■□□□□ 0.16
SGCDQ92629 AC069544.1-201ENST00000609399 999 ntBASIC16.08■□□□□ 0.16
SGCDQ92629 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SGCDQ92629 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SGCDQ92629 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SGCDQ92629 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.08■□□□□ 0.16
SGCDQ92629 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.08■□□□□ 0.16
SGCDQ92629 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SGCDQ92629 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SGCDQ92629 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SGCDQ92629 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.07■□□□□ 0.16
SGCDQ92629 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.07■□□□□ 0.16
SGCDQ92629 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.07■□□□□ 0.16
SGCDQ92629 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.07■□□□□ 0.16
SGCDQ92629 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.07■□□□□ 0.16
SGCDQ92629 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.07■□□□□ 0.16
SGCDQ92629 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.07■□□□□ 0.16
SGCDQ92629 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SGCDQ92629 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms