Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF135Q8IUD6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AC135050.7-201ENST00000624508 2218 ntBASIC18.6■□□□□ 0.57
RNF135Q8IUD6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 PAWRP1-201ENST00000451083 565 ntBASIC18.6■□□□□ 0.57
RNF135Q8IUD6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF135Q8IUD6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 KRT18P27-201ENST00000427733 1299 ntBASIC18.59■□□□□ 0.57
RNF135Q8IUD6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 BCRP1-201ENST00000444246 691 ntBASIC18.59■□□□□ 0.57
RNF135Q8IUD6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF135Q8IUD6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
RNF135Q8IUD6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RNF135Q8IUD6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF135Q8IUD6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF135Q8IUD6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF135Q8IUD6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RNF135Q8IUD6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF135Q8IUD6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 ELL2P1-201ENST00000413990 1906 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms