Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.11■□□□□ 0.01
LYRM1O43325 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 AC009949.1-201ENST00000623048 1830 ntBASIC15.11■□□□□ 0.01
LYRM1O43325 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 AL023284.2-201ENST00000405850 579 ntBASIC15.11■□□□□ 0.01
LYRM1O43325 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LYRM1O43325 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.11■□□□□ 0.01
LYRM1O43325 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
LYRM1O43325 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LYRM1O43325 AC008622.2-201ENST00000617006 1229 ntBASIC15.11■□□□□ 0.01
LYRM1O43325 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.11■□□□□ 0.01
LYRM1O43325 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.11■□□□□ 0.01
LYRM1O43325 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.11■□□□□ 0.01
LYRM1O43325 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LYRM1O43325 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LYRM1O43325 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LYRM1O43325 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.11■□□□□ 0.01
LYRM1O43325 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYRM1O43325 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.11■□□□□ 0.01
LYRM1O43325 AC092384.3-202ENST00000564646 2873 ntBASIC15.1■□□□□ 0.01
LYRM1O43325 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LYRM1O43325 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LYRM1O43325 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.1■□□□□ 0.01
LYRM1O43325 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.1■□□□□ 0.01
LYRM1O43325 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.1■□□□□ 0.01
LYRM1O43325 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.1■□□□□ 0.01
LYRM1O43325 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 PRKY-204ENST00000533551 1019 ntBASIC15.1■□□□□ 0.01
LYRM1O43325 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.1■□□□□ 0.01
LYRM1O43325 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 HLA-B-256ENST00000639848 1089 ntBASIC15.1■□□□□ 0.01
LYRM1O43325 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.1■□□□□ 0.01
LYRM1O43325 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYRM1O43325 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LYRM1O43325 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.1■□□□□ 0.01
LYRM1O43325 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms