Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 COL6A4P2-202ENST00000504443 2753 ntBASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 AC131902.2-201ENST00000566892 2172 ntBASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42SE1Q9NRR8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 DGCR9-201ENST00000609630 2415 ntBASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC8.96□□□□□ -0.97
CDC42SE1Q9NRR8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 LBH-205ENST00000407930 756 ntTSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC8.96□□□□□ -0.98
CDC42SE1Q9NRR8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms