Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 AC135050.7-201ENST00000624508 2218 ntBASIC18.09■□□□□ 0.49
PAF1Q8N7H5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 RN7SL606P-201ENST00000472779 293 ntBASIC18.09■□□□□ 0.49
PAF1Q8N7H5 AC012615.1-201ENST00000565797 1299 ntBASIC18.09■□□□□ 0.49
PAF1Q8N7H5 AC116407.2-201ENST00000613639 860 ntBASIC18.09■□□□□ 0.49
PAF1Q8N7H5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 BICD1-207ENST00000551848 1962 ntBASIC18.09■□□□□ 0.49
PAF1Q8N7H5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PAF1Q8N7H5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PAF1Q8N7H5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 KRT17P6-201ENST00000453795 1220 ntBASIC18.08■□□□□ 0.48
PAF1Q8N7H5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PAF1Q8N7H5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 AC007613.1-201ENST00000572811 2597 ntBASIC18.07■□□□□ 0.48
PAF1Q8N7H5 AL390961.4-201ENST00000623958 2535 ntBASIC18.07■□□□□ 0.48
PAF1Q8N7H5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 MIR3180-1-201ENST00000580374 94 ntBASIC18.07■□□□□ 0.48
PAF1Q8N7H5 MIR3180-3-201ENST00000584616 94 ntBASIC18.07■□□□□ 0.48
PAF1Q8N7H5 LINC01711-201ENST00000598340 967 ntBASIC18.07■□□□□ 0.48
PAF1Q8N7H5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 AC138028.4-201ENST00000564984 1845 ntBASIC18.07■□□□□ 0.48
PAF1Q8N7H5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms