Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
UBE2AP49459 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
UBE2AP49459 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 SLC25A3P1-201ENST00000443844 931 ntBASIC11.19□□□□□ -0.62
UBE2AP49459 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.19□□□□□ -0.62
UBE2AP49459 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.19□□□□□ -0.62
UBE2AP49459 AC145285.6-201ENST00000604632 637 ntBASIC11.19□□□□□ -0.62
UBE2AP49459 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC11.19□□□□□ -0.62
UBE2AP49459 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 AC133561.5-201ENST00000635547 218 ntBASIC11.19□□□□□ -0.62
UBE2AP49459 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 LINC01126-201ENST00000623515 1646 ntBASIC11.19□□□□□ -0.62
UBE2AP49459 AL161772.1-201ENST00000610494 4412 ntBASIC11.19□□□□□ -0.62
UBE2AP49459 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 AL024508.2-201ENST00000607749 1894 ntBASIC11.19□□□□□ -0.62
UBE2AP49459 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
UBE2AP49459 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2AP49459 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
UBE2AP49459 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 AL137013.1-201ENST00000432946 1228 ntBASIC11.18□□□□□ -0.62
UBE2AP49459 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 AC116407.2-201ENST00000613639 860 ntBASIC11.18□□□□□ -0.62
UBE2AP49459 AC005363.2-201ENST00000618631 242 ntBASIC11.18□□□□□ -0.62
UBE2AP49459 AL023973.1-201ENST00000624619 620 ntBASIC11.18□□□□□ -0.62
UBE2AP49459 AL157888.1-201ENST00000631930 593 ntBASIC11.18□□□□□ -0.62
UBE2AP49459 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 PRORSD1P-202ENST00000563365 2154 ntBASIC11.18□□□□□ -0.62
UBE2AP49459 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms