Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 KRT18P65-201ENST00000439811 1286 ntBASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 UBE2SP1-201ENST00000450587 669 ntBASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 RBM17P1-201ENST00000453646 1190 ntBASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 FAM201B-201ENST00000458407 597 ntBASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 ITM2C-210ENST00000620962 501 ntBASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 BX276092.7-203ENST00000637198 1536 ntBASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UBE2D4Q9Y2X8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 AC116353.5-201ENST00000638148 1699 ntBASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 C2orf69P3-201ENST00000565542 1120 ntBASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.27□□□□□ -0.45
UBE2D4Q9Y2X8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms