Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AL928711.1-201ENST00000570165 459 ntBASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 AC004408.2-201ENST00000623613 2777 ntBASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 AC009949.1-201ENST00000623048 1830 ntBASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 AC074386.1-202ENST00000463561 864 ntBASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 AC002558.1-201ENST00000488906 803 ntBASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC9Q9UKV0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AL020996.1-203ENST00000536896 2307 ntBASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 FAM58CP-201ENST00000435741 640 ntBASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AC023141.13-201ENST00000604991 943 ntBASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC9Q9UKV0 AC025580.3-201ENST00000617932 1424 ntBASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 AC100803.2-201ENST00000562459 1963 ntBASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms