Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 AC148477.8-201ENST00000624298 468 ntBASIC17.55■□□□□ 0.4
SPASTQ9UBP0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 AP000997.3-201ENST00000623333 2250 ntBASIC17.54■□□□□ 0.4
SPASTQ9UBP0 ESPNP-201ENST00000270691 2015 ntBASIC17.54■□□□□ 0.4
SPASTQ9UBP0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.54■□□□□ 0.4
SPASTQ9UBP0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SPASTQ9UBP0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 AC068880.1-201ENST00000507289 2297 ntBASIC17.53■□□□□ 0.4
SPASTQ9UBP0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 FAM220CP-201ENST00000395253 831 ntBASIC17.53■□□□□ 0.4
SPASTQ9UBP0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.53■□□□□ 0.4
SPASTQ9UBP0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.52■□□□□ 0.4
SPASTQ9UBP0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.52■□□□□ 0.4
SPASTQ9UBP0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPASTQ9UBP0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPASTQ9UBP0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPASTQ9UBP0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPASTQ9UBP0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPASTQ9UBP0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms