Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 HLA-J-201ENST00000462773 1622 ntBASIC18.64■□□□□ 0.57
UBA3Q8TBC4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 UNC93B7-201ENST00000509439 705 ntBASIC18.64■□□□□ 0.57
UBA3Q8TBC4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 AC005104.2-201ENST00000427818 678 ntBASIC18.63■□□□□ 0.57
UBA3Q8TBC4 AC103564.2-201ENST00000432853 1299 ntBASIC18.63■□□□□ 0.57
UBA3Q8TBC4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA3Q8TBC4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA3Q8TBC4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA3Q8TBC4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA3Q8TBC4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms