Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 MYCLP1-201ENST00000372451 1075 ntBASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 PMS2P1-201ENST00000431037 1228 ntBASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 AC034105.1-201ENST00000563488 319 ntBASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 AL356488.2-201ENST00000602755 427 ntBASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 AC004706.3-202ENST00000621574 984 ntBASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC60Q8IWA6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 ELK2BP-201ENST00000415014 1224 ntBASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC60Q8IWA6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC60Q8IWA6 LINC00304-203ENST00000565008 1864 ntBASIC19.52■□□□□ 0.71
CCDC60Q8IWA6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC60Q8IWA6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 NCF1C-201ENST00000438382 1427 ntBASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 UNC93B6-202ENST00000528242 690 ntBASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 AC006504.4-201ENST00000592118 1568 ntBASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC60Q8IWA6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms