Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 AL031133.1-201ENST00000406807 723 ntBASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 AL441883.1-201ENST00000566170 1045 ntBASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 AC008741.2-201ENST00000612792 3115 ntBASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN4Q6ZMN7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 AL499627.1-201ENST00000569373 2188 ntBASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 NEK4P2-201ENST00000580004 1012 ntBASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 AC008622.2-201ENST00000617006 1229 ntBASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN4Q6ZMN7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 LINC00554-201ENST00000564841 3011 ntBASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 MIR4674-201ENST00000582457 87 ntBASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 AC091076.1-201ENST00000610741 619 ntBASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 PCDHA14-201ENST00000506751 2298 ntBASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN4Q6ZMN7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms