Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 MIR574-201ENST00000385209 96 ntBASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 IGHV3-22-201ENST00000520721 359 ntBASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 AC019129.2-201ENST00000609837 1235 ntBASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 KRT18P55-202ENST00000578578 1546 ntBASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 AC106820.2-201ENST00000563775 3264 ntBASIC16.27■□□□□ 0.2
H3F3CQ6NXT2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 HLA-J-201ENST00000462773 1622 ntBASIC16.27■□□□□ 0.19
H3F3CQ6NXT2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 SIRPAP1-201ENST00000448467 1770 ntBASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 RPL13AP23-201ENST00000480739 586 ntBASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 AC012640.2-201ENST00000561606 901 ntBASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 AC009949.1-201ENST00000623048 1830 ntBASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3CQ6NXT2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 AC132938.5-201ENST00000624980 1813 ntBASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 LAGE3P1-201ENST00000425356 484 ntBASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 PMS2P1-201ENST00000431037 1228 ntBASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms