Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RNF220Q5VTB9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF220Q5VTB9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 WWOX-216ENST00000569818 525 ntBASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 KRT8P7-201ENST00000533003 1432 ntBASIC17.01■□□□□ 0.31
RNF220Q5VTB9 AC092338.2-201ENST00000568827 1415 ntBASIC17.01■□□□□ 0.31
RNF220Q5VTB9 HOXB1-202ENST00000577092 1414 ntBASIC17.01■□□□□ 0.31
RNF220Q5VTB9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 LINC02228-204ENST00000642115 2962 ntBASIC17.01■□□□□ 0.31
RNF220Q5VTB9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF220Q5VTB9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 KRT17P2-201ENST00000300992 1314 ntBASIC17■□□□□ 0.31
RNF220Q5VTB9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF220Q5VTB9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
RNF220Q5VTB9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17■□□□□ 0.31
RNF220Q5VTB9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
RNF220Q5VTB9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17■□□□□ 0.31
RNF220Q5VTB9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17■□□□□ 0.31
RNF220Q5VTB9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17■□□□□ 0.31
RNF220Q5VTB9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF220Q5VTB9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17■□□□□ 0.31
RNF220Q5VTB9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17■□□□□ 0.31
RNF220Q5VTB9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF220Q5VTB9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17■□□□□ 0.31
RNF220Q5VTB9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF220Q5VTB9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17■□□□□ 0.31
RNF220Q5VTB9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
RNF220Q5VTB9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF220Q5VTB9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF220Q5VTB9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.99■□□□□ 0.31
RNF220Q5VTB9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms