Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN5P54829 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PTPN5P54829 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN5P54829 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN5P54829 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN5P54829 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN5P54829 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPN5P54829 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN5P54829 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN5P54829 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTPN5P54829 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN5P54829 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN5P54829 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN5P54829 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN5P54829 ABALON-201ENST00000629058 1903 ntBASIC18.14■□□□□ 0.49
PTPN5P54829 AC104581.1-202ENST00000635932 2618 ntBASIC18.14■□□□□ 0.49
PTPN5P54829 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PTPN5P54829 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN5P54829 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN5P54829 CRYGEP-201ENST00000412192 528 ntBASIC18.14■□□□□ 0.49
PTPN5P54829 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN5P54829 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.14■□□□□ 0.49
PTPN5P54829 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN5P54829 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PTPN5P54829 AL359881.2-201ENST00000602973 570 ntBASIC18.14■□□□□ 0.49
PTPN5P54829 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN5P54829 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 PHGDH-209ENST00000641074 1780 ntBASIC18.14■□□□□ 0.49
PTPN5P54829 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN5P54829 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN5P54829 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN5P54829 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN5P54829 AC135776.1-201ENST00000319817 2481 ntBASIC18.13■□□□□ 0.49
PTPN5P54829 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTPN5P54829 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN5P54829 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 AC093010.1-201ENST00000473625 1624 ntBASIC18.13■□□□□ 0.49
PTPN5P54829 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN5P54829 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
PTPN5P54829 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN5P54829 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN5P54829 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.13■□□□□ 0.49
PTPN5P54829 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN5P54829 AL589935.2-201ENST00000616471 1231 ntBASIC18.13■□□□□ 0.49
PTPN5P54829 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PTPN5P54829 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN5P54829 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN5P54829 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTPN5P54829 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PTPN5P54829 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN5P54829 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN5P54829 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN5P54829 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN5P54829 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PTPN5P54829 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN5P54829 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN5P54829 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN5P54829 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN5P54829 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms