Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM2P07951 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM2P07951 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM2P07951 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 PHGDH-209ENST00000641074 1780 ntBASIC20.09■□□□□ 0.81
TPM2P07951 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 KRT18P23-201ENST00000435622 1283 ntBASIC20.09■□□□□ 0.81
TPM2P07951 TSPY20P-201ENST00000450910 630 ntBASIC20.09■□□□□ 0.81
TPM2P07951 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.09■□□□□ 0.81
TPM2P07951 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM2P07951 REXO1L10P-201ENST00000615707 1290 ntBASIC20.09■□□□□ 0.81
TPM2P07951 REXO1L12P-201ENST00000622156 912 ntBASIC20.09■□□□□ 0.81
TPM2P07951 AL049637.2-201ENST00000641778 930 ntBASIC20.09■□□□□ 0.81
TPM2P07951 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.09■□□□□ 0.81
TPM2P07951 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM2P07951 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
TPM2P07951 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM2P07951 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM2P07951 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM2P07951 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
TPM2P07951 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM2P07951 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TPM2P07951 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM2P07951 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM2P07951 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.08■□□□□ 0.81
TPM2P07951 AC233702.5-201ENST00000584107 538 ntBASIC20.08■□□□□ 0.81
TPM2P07951 AC113410.3-201ENST00000623366 203 ntBASIC20.08■□□□□ 0.81
TPM2P07951 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM2P07951 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TPM2P07951 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TPM2P07951 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.08■□□□□ 0.8
TPM2P07951 HOXB1-202ENST00000577092 1414 ntBASIC20.08■□□□□ 0.8
TPM2P07951 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM2P07951 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM2P07951 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM2P07951 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TPM2P07951 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.08■□□□□ 0.8
TPM2P07951 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.08■□□□□ 0.8
TPM2P07951 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TPM2P07951 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM2P07951 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.07■□□□□ 0.8
TPM2P07951 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 PRORSD1P-201ENST00000295112 541 ntBASIC20.07■□□□□ 0.8
TPM2P07951 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM2P07951 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.07■□□□□ 0.8
TPM2P07951 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 AP005242.2-201ENST00000580065 1175 ntBASIC20.07■□□□□ 0.8
TPM2P07951 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 AC026471.5-201ENST00000615068 467 ntBASIC20.07■□□□□ 0.8
TPM2P07951 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TPM2P07951 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM2P07951 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 AC006116.8-202ENST00000587620 1550 ntBASIC20.07■□□□□ 0.8
TPM2P07951 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TPM2P07951 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TPM2P07951 AC007950.2-201ENST00000615045 2347 ntBASIC20.07■□□□□ 0.8
TPM2P07951 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM2P07951 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.06■□□□□ 0.8
TPM2P07951 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
TPM2P07951 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TPM2P07951 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.06■□□□□ 0.8
TPM2P07951 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TPM2P07951 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms