Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 SNHG9-202ENST00000564014 471 ntBASIC18.17■□□□□ 0.5
BRD9Q9H8M2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 AC093677.2-201ENST00000600169 1863 ntBASIC18.17■□□□□ 0.5
BRD9Q9H8M2 AC135776.1-201ENST00000319817 2481 ntBASIC18.17■□□□□ 0.5
BRD9Q9H8M2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD9Q9H8M2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC093010.1-201ENST00000473625 1624 ntBASIC18.16■□□□□ 0.5
BRD9Q9H8M2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 KRT18P28-201ENST00000453838 1332 ntBASIC18.16■□□□□ 0.5
BRD9Q9H8M2 AC006504.4-201ENST00000592118 1568 ntBASIC18.16■□□□□ 0.5
BRD9Q9H8M2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD9Q9H8M2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BRD9Q9H8M2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms