Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 AC097488.1-201ENST00000507834 756 ntBASIC13.5□□□□□ -0.25
LINC00479Q96M42 AC104390.1-201ENST00000555663 520 ntBASIC13.5□□□□□ -0.25
LINC00479Q96M42 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 PCDHA1-201ENST00000378133 2726 ntBASIC13.49□□□□□ -0.25
LINC00479Q96M42 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 C1QBPP2-201ENST00000528754 825 ntBASIC13.49□□□□□ -0.25
LINC00479Q96M42 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CR769767.2-201ENST00000622735 460 ntBASIC13.49□□□□□ -0.25
LINC00479Q96M42 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00479Q96M42 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC00479Q96M42 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 AL603756.1-201ENST00000606511 2163 ntBASIC13.48□□□□□ -0.25
LINC00479Q96M42 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00479Q96M42 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.48□□□□□ -0.25
LINC00479Q96M42 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00479Q96M42 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms