Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRCC3P46736 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 AC006504.4-201ENST00000592118 1568 ntBASIC18.72■□□□□ 0.59
BRCC3P46736 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BRCC3P46736 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.72■□□□□ 0.59
BRCC3P46736 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BRCC3P46736 MED15P5-201ENST00000423150 992 ntBASIC18.72■□□□□ 0.59
BRCC3P46736 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 AC009947.1-201ENST00000444350 727 ntBASIC18.72■□□□□ 0.59
BRCC3P46736 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.72■□□□□ 0.59
BRCC3P46736 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 AC027601.4-201ENST00000611259 610 ntBASIC18.72■□□□□ 0.59
BRCC3P46736 AC006538.3-201ENST00000612495 578 ntBASIC18.72■□□□□ 0.59
BRCC3P46736 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRCC3P46736 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.72■□□□□ 0.59
BRCC3P46736 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
BRCC3P46736 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BRCC3P46736 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.71■□□□□ 0.59
BRCC3P46736 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
BRCC3P46736 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.71■□□□□ 0.59
BRCC3P46736 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.71■□□□□ 0.59
BRCC3P46736 AC007967.2-201ENST00000432613 625 ntBASIC18.71■□□□□ 0.59
BRCC3P46736 AC002558.1-201ENST00000488906 803 ntBASIC18.71■□□□□ 0.59
BRCC3P46736 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 AC136632.2-201ENST00000512891 861 ntBASIC18.71■□□□□ 0.59
BRCC3P46736 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.71■□□□□ 0.59
BRCC3P46736 PGAM5P1-201ENST00000518923 814 ntBASIC18.71■□□□□ 0.59
BRCC3P46736 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.71■□□□□ 0.59
BRCC3P46736 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.71■□□□□ 0.59
BRCC3P46736 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.71■□□□□ 0.59
BRCC3P46736 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.71■□□□□ 0.59
BRCC3P46736 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.71■□□□□ 0.59
BRCC3P46736 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.71■□□□□ 0.59
BRCC3P46736 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRCC3P46736 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.71■□□□□ 0.59
BRCC3P46736 AC009336.1-201ENST00000608941 1553 ntBASIC18.71■□□□□ 0.59
BRCC3P46736 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRCC3P46736 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
BRCC3P46736 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.7■□□□□ 0.58
BRCC3P46736 REXO1L11P-201ENST00000620964 1927 ntBASIC18.7■□□□□ 0.58
BRCC3P46736 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BRCC3P46736 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.7■□□□□ 0.58
BRCC3P46736 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
BRCC3P46736 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 AL354751.1-201ENST00000412768 1863 ntBASIC18.7■□□□□ 0.58
BRCC3P46736 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
BRCC3P46736 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRCC3P46736 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms