Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 CROCCP2-202ENST00000412962 2773 ntBASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 AL023806.1-201ENST00000603994 1649 ntBASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 AC096633.1-201ENST00000422446 749 ntBASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 KRT126P-201ENST00000549467 1181 ntBASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCC2Q8TAQ2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMARCC2Q8TAQ2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 AL845331.1-201ENST00000424978 1190 ntBASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 KRT17P6-201ENST00000453795 1220 ntBASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 BX276092.7-203ENST00000637198 1536 ntBASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCC2Q8TAQ2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms