Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC125634.1-201ENST00000438758 1403 ntBASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 AC012313.10-201ENST00000623509 926 ntBASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC39BQ5VTQ0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 TSPY19P-201ENST00000418461 509 ntBASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 TSPY18P-201ENST00000441642 509 ntBASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 FOSL1P1-201ENST00000511041 816 ntBASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 AC111152.3-201ENST00000569699 673 ntBASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 AC138894.3-201ENST00000603787 634 ntBASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 AL691432.3-201ENST00000621860 400 ntBASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC39BQ5VTQ0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 KRT16P4-201ENST00000453883 522 ntBASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 AC096582.2-201ENST00000510860 516 ntBASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 BNIP3P18-201ENST00000593976 575 ntBASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 LINC01711-201ENST00000598340 967 ntBASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 AC114341.1-201ENST00000618070 349 ntBASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 AC097374.2-201ENST00000618617 1306 ntBASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.4■□□□□ 0.54
TTC39BQ5VTQ0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms