Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSP1P33241 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LSP1P33241 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSP1P33241 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
LSP1P33241 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LSP1P33241 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LSP1P33241 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.76■□□□□ 0.43
LSP1P33241 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.76■□□□□ 0.43
LSP1P33241 AL445675.2-201ENST00000620291 557 ntBASIC17.76■□□□□ 0.43
LSP1P33241 AC131212.4-201ENST00000623606 975 ntBASIC17.76■□□□□ 0.43
LSP1P33241 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
LSP1P33241 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LSP1P33241 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSP1P33241 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.76■□□□□ 0.43
LSP1P33241 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.76■□□□□ 0.43
LSP1P33241 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.76■□□□□ 0.43
LSP1P33241 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.76■□□□□ 0.43
LSP1P33241 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.75■□□□□ 0.43
LSP1P33241 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.75■□□□□ 0.43
LSP1P33241 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 AC036111.1-201ENST00000533973 1582 ntBASIC17.75■□□□□ 0.43
LSP1P33241 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.75■□□□□ 0.43
LSP1P33241 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LSP1P33241 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.75■□□□□ 0.43
LSP1P33241 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.75■□□□□ 0.43
LSP1P33241 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LSP1P33241 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.75■□□□□ 0.43
LSP1P33241 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.75■□□□□ 0.43
LSP1P33241 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LSP1P33241 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.75■□□□□ 0.43
LSP1P33241 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.75■□□□□ 0.43
LSP1P33241 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.75■□□□□ 0.43
LSP1P33241 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.75■□□□□ 0.43
LSP1P33241 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 AC009949.1-201ENST00000623048 1830 ntBASIC17.75■□□□□ 0.43
LSP1P33241 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSP1P33241 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LSP1P33241 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LSP1P33241 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LSP1P33241 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 AC004980.1-204ENST00000429707 299 ntBASIC17.74■□□□□ 0.43
LSP1P33241 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.74■□□□□ 0.43
LSP1P33241 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.74■□□□□ 0.43
LSP1P33241 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSP1P33241 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LSP1P33241 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms