Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.971e-8■■■□□ 16.5
RPS3P23396 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.884e-20■■■□□ 16.5
RPS3P23396 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.784e-20■■■□□ 16.5
RPS3P23396 GTPBP1-202ENST00000418601 810 ntTSL 217.7■□□□□ 0.428e-8■■■□□ 16.5
RPS3P23396 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.2■□□□□ 0.348e-8■■■□□ 16.5
RPS3P23396 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.18■□□□□ 0.348e-8■■■□□ 16.5
RPS3P23396 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.291e-8■■■□□ 16.5
RPS3P23396 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.281e-8■■■□□ 16.5
RPS3P23396 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.42■□□□□ 0.228e-8■■■□□ 16.5
RPS3P23396 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.181e-15■■■□□ 16.5
RPS3P23396 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.161e-8■■■□□ 16.5
RPS3P23396 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.141e-8■■■□□ 16.5
RPS3P23396 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.111e-8■■■□□ 16.5
RPS3P23396 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.098e-8■■■□□ 16.5
RPS3P23396 MED16-212ENST00000607471 2004 ntTSL 1 (best)15.57■□□□□ 0.088e-8■■■□□ 16.5
RPS3P23396 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.068e-8■■■□□ 16.5
RPS3P23396 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.041e-8■■■□□ 16.5
RPS3P23396 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.018e-8■■■□□ 16.5
RPS3P23396 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.031e-8■■■□□ 16.5
RPS3P23396 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.038e-8■■■□□ 16.5
RPS3P23396 STAT1-211ENST00000464072 865 ntTSL 214.82□□□□□ -0.048e-8■■■□□ 16.5
RPS3P23396 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.048e-8■■■□□ 16.5
RPS3P23396 STAT1-209ENST00000452281 2594 ntTSL 1 (best)14.5□□□□□ -0.098e-8■■■□□ 16.5
RPS3P23396 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.118e-8■■■□□ 16.5
RPS3P23396 TFR2-209ENST00000473963 771 ntTSL 314.22□□□□□ -0.138e-8■■■□□ 16.5
RPS3P23396 MED16-210ENST00000606248 3181 ntTSL 1 (best)13.47□□□□□ -0.258e-8■■■□□ 16.5
RPS3P23396 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.271e-8■■■□□ 16.5
RPS3P23396 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.328e-8■■■□□ 16.5
RPS3P23396 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.378e-8■■■□□ 16.5
RPS3P23396 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.388e-8■■■□□ 16.5
RPS3P23396 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.468e-8■■■□□ 16.5
RPS3P23396 STAT1-212ENST00000540176 4216 ntTSL 5 BASIC10.87□□□□□ -0.678e-8■■■□□ 16.5
RPS3P23396 GTPBP1-209ENST00000484657 585 ntTSL 410.79□□□□□ -0.688e-8■■■□□ 16.5
RPS3P23396 GTPBP1-205ENST00000461428 476 ntTSL 210.09□□□□□ -0.798e-8■■■□□ 16.5
RPS3P23396 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.918e-8■■■□□ 16.5
RPS3P23396 MAPRE2-208ENST00000588349 543 ntTSL 56.71□□□□□ -1.348e-8■■■□□ 16.5
RPS3P23396 ATP6V1E1-209ENST00000484653 747 ntTSL 54.12□□□□□ -1.758e-8■■■□□ 16.5
RPS3P23396 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.38■□□□□ 0.531e-8■■■□□ 16.5
RPS3P23396 ISYNA1-209ENST00000582287 696 ntTSL 1 (best)17.03■□□□□ 0.321e-8■■■□□ 16.5
RPS3P23396 ISYNA1-207ENST00000581672 793 ntTSL 29.9□□□□□ -0.821e-8■■■□□ 16.5
RPS3P23396 DCTN1-225ENST00000497666 479 ntTSL 315.77■□□□□ 0.123e-6■■■□□ 16.5
RPS3P23396 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.033e-6■■■□□ 16.5
RPS3P23396 DCTN1-218ENST00000466110 5414 ntTSL 212.41□□□□□ -0.423e-6■■■□□ 16.5
RPS3P23396 DCTN1-210ENST00000434055 4229 ntTSL 212.32□□□□□ -0.443e-6■■■□□ 16.5
RPS3P23396 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC11.68□□□□□ -0.543e-6■■■□□ 16.5
RPS3P23396 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC10.91□□□□□ -0.663e-6■■■□□ 16.5
RPS3P23396 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.673e-6■■■□□ 16.5
RPS3P23396 DCTN1-202ENST00000394003 4479 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.713e-6■■■□□ 16.5
RPS3P23396 DCTN1-204ENST00000409438 4145 ntTSL 1 (best) BASIC10.18□□□□□ -0.783e-6■■■□□ 16.5
RPS3P23396 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC9.86□□□□□ -0.833e-6■■■□□ 16.5
RPS3P23396 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.893e-6■■■□□ 16.5
RPS3P23396 KRT19-206ENST00000479031 427 ntTSL 213.97□□□□□ -0.173e-13■■■□□ 16.5
RPS3P23396 MGAT1-208ENST00000504671 878 ntTSL 315.79■□□□□ 0.129e-7■■■□□ 16.5
RPS3P23396 ATP1A1-202ENST00000369494 698 ntTSL 38.86□□□□□ -0.991e-10■■■□□ 16.5
RPS3P23396 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.011e-6■■■□□ 16.5
RPS3P23396 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.44■□□□□ 0.541e-6■■■□□ 16.5
RPS3P23396 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC9.19□□□□□ -0.948e-7■■■□□ 16.5
RPS3P23396 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.188e-7■■■□□ 16.5
RPS3P23396 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.56□□□□□ -1.28e-7■■■□□ 16.5
RPS3P23396 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.518e-7■■■□□ 16.5
RPS3P23396 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.668e-7■■■□□ 16.5
RPS3P23396 STT3A-215ENST00000531599 973 ntTSL 37.94□□□□□ -1.141e-7■■■□□ 16.5
RPS3P23396 CD53-202ENST00000464329 416 ntTSL 24.46□□□□□ -1.78e-8■■■□□ 16.5
RPS3P23396 CD53-205ENST00000497404 917 ntTSL 54.36□□□□□ -1.718e-8■■■□□ 16.5
RPS3P23396 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.151e-7■■■□□ 16.4
RPS3P23396 MBOAT7-204ENST00000414665 876 ntTSL 219.9■□□□□ 0.782e-6■■■□□ 16.4
RPS3P23396 MAN2B1-216ENST00000598876 551 ntTSL 418.38■□□□□ 0.536e-8■■■□□ 16.4
RPS3P23396 MAN2B1-214ENST00000596512 556 ntTSL 417.54■□□□□ 0.46e-8■■■□□ 16.4
RPS3P23396 MAN2B1-217ENST00000600281 583 ntTSL 216.94■□□□□ 0.36e-8■■■□□ 16.4
RPS3P23396 MAN2B1-209ENST00000486847 535 ntTSL 416.94■□□□□ 0.36e-8■■■□□ 16.4
RPS3P23396 MSH6-202ENST00000411819 548 ntTSL 421.46■■□□□ 1.038e-8■■■□□ 16.4
RPS3P23396 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.832e-15■■■□□ 16.4
RPS3P23396 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.56■□□□□ 0.728e-8■■■□□ 16.4
RPS3P23396 MSH6-206ENST00000455383 578 ntTSL 517.76■□□□□ 0.438e-8■■■□□ 16.4
RPS3P23396 DRG1-202ENST00000416465 612 ntTSL 517.53■□□□□ 0.48e-8■■■□□ 16.4
RPS3P23396 MSH6-207ENST00000456246 846 ntTSL 317.3■□□□□ 0.368e-8■■■□□ 16.4
RPS3P23396 MSH6-203ENST00000420813 491 ntTSL 416.67■□□□□ 0.268e-8■■■□□ 16.4
RPS3P23396 PPP1CA-210ENST00000542876 588 ntTSL 316.64■□□□□ 0.258e-8■■■□□ 16.4
RPS3P23396 PPP1CA-211ENST00000546202 554 ntTSL 416.11■□□□□ 0.178e-8■■■□□ 16.4
RPS3P23396 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.168e-8■■■□□ 16.4
RPS3P23396 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.66■□□□□ 0.18e-8■■■□□ 16.4
RPS3P23396 NCBP2-202ENST00000411704 564 ntTSL 515.58■□□□□ 0.088e-8■■■□□ 16.4
RPS3P23396 NFE2-205ENST00000553198 1208 ntTSL 514.74□□□□□ -0.058e-8■■■□□ 16.4
RPS3P23396 NOSIP-205ENST00000596477 865 ntTSL 314.6□□□□□ -0.078e-8■■■□□ 16.4
RPS3P23396 NEDD8-MDP1-204ENST00000605847 758 ntTSL 514.37□□□□□ -0.112e-15■■■□□ 16.4
RPS3P23396 NCBP2-211ENST00000468923 1096 ntTSL 214.22□□□□□ -0.138e-8■■■□□ 16.4
RPS3P23396 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.21□□□□□ -0.138e-8■■■□□ 16.4
RPS3P23396 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.15□□□□□ -0.148e-8■■■□□ 16.4
RPS3P23396 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.158e-8■■■□□ 16.4
RPS3P23396 NCBP2-205ENST00000428425 2220 ntTSL 1 (best)13.67□□□□□ -0.228e-8■■■□□ 16.4
RPS3P23396 PSMC6-205ENST00000553899 706 ntTSL 313.46□□□□□ -0.258e-8■■■□□ 16.4
RPS3P23396 DRG1-205ENST00000486584 318 ntTSL 512.95□□□□□ -0.348e-8■■■□□ 16.4
RPS3P23396 NEDD8-208ENST00000560427 654 ntTSL 212.77□□□□□ -0.372e-15■■■□□ 16.4
RPS3P23396 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.438e-8■■■□□ 16.4
RPS3P23396 NEDD8-MDP1-203ENST00000604306 681 ntTSL 512.27□□□□□ -0.452e-15■■■□□ 16.4
RPS3P23396 NCBP2-210ENST00000467803 771 ntTSL 311.58□□□□□ -0.568e-8■■■□□ 16.4
RPS3P23396 NCBP2-212ENST00000479647 552 ntTSL 310.64□□□□□ -0.718e-8■■■□□ 16.4
RPS3P23396 NEDD8-204ENST00000526430 286 ntTSL 310.61□□□□□ -0.712e-15■■■□□ 16.4
RPS3P23396 NEDD8-205ENST00000527046 847 ntTSL 210.61□□□□□ -0.712e-15■■■□□ 16.4
RPS3P23396 G3BP2-208ENST00000507252 567 ntTSL 410.07□□□□□ -0.88e-8■■■□□ 16.4
Retrieved 100 of 24,271 protein–RNA pairs in 220.3 ms