RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 NISCHQ9Y2I1 1504 aa32.36■■■□□ 2.77
PSMC6-205ENST00000553899 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
PSMC6-205ENST00000553899 ABCC9O60706 1549 aa27.41■■□□□ 1.98
PSMC6-205ENST00000553899 ZCCHC6Q5VYS8 1495 aaKnown RBP27.04■■□□□ 1.92
PSMC6-205ENST00000553899 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
PSMC6-205ENST00000553899 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
PSMC6-205ENST00000553899 NACADO15069 1562 aa26.84■■□□□ 1.89
PSMC6-205ENST00000553899 RB1CC1Q8TDY2 1594 aa26.73■■□□□ 1.87
PSMC6-205ENST00000553899 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
PSMC6-205ENST00000553899 UNC13AQ9UPW8 1703 aa26.07■■□□□ 1.76
PSMC6-205ENST00000553899 SCRIBQ14160 1630 aa25.98■■□□□ 1.75
PSMC6-205ENST00000553899 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
PSMC6-205ENST00000553899 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
PSMC6-205ENST00000553899 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
PSMC6-205ENST00000553899 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
PSMC6-205ENST00000553899 BAZ1AQ9NRL2 1556 aaPredicted RBP25.08■■□□□ 1.61
PSMC6-205ENST00000553899 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
PSMC6-205ENST00000553899 SMARCA4P51532 1647 aa25■■□□□ 1.59
PSMC6-205ENST00000553899 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
PSMC6-205ENST00000553899 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
PSMC6-205ENST00000553899 PEG3Q9GZU2 1588 aa24.86■■□□□ 1.57
PSMC6-205ENST00000553899 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
PSMC6-205ENST00000553899 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
PSMC6-205ENST00000553899 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
PSMC6-205ENST00000553899 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
PSMC6-205ENST00000553899 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
PSMC6-205ENST00000553899 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
PSMC6-205ENST00000553899 WIZO95785 1651 aa24.6■■□□□ 1.53
PSMC6-205ENST00000553899 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
PSMC6-205ENST00000553899 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
PSMC6-205ENST00000553899 SUPT5HO00267 1087 aaKnown RBP24.29■■□□□ 1.48
PSMC6-205ENST00000553899 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
PSMC6-205ENST00000553899 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
PSMC6-205ENST00000553899 CADPSQ9ULU8 1353 aa24.01■■□□□ 1.43
PSMC6-205ENST00000553899 CFTRP13569 1480 aa23.98■■□□□ 1.43
PSMC6-205ENST00000553899 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
PSMC6-205ENST00000553899 NESP48681 1621 aa23.84■■□□□ 1.41
PSMC6-205ENST00000553899 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
PSMC6-205ENST00000553899 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
PSMC6-205ENST00000553899 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
PSMC6-205ENST00000553899 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
PSMC6-205ENST00000553899 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
PSMC6-205ENST00000553899 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
PSMC6-205ENST00000553899 MRC2Q9UBG0 1479 aa23.51■■□□□ 1.35
PSMC6-205ENST00000553899 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
PSMC6-205ENST00000553899 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
PSMC6-205ENST00000553899 WDR62O43379 1518 aa23.45■■□□□ 1.34
PSMC6-205ENST00000553899 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
PSMC6-205ENST00000553899 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
PSMC6-205ENST00000553899 CUX2O14529 1486 aa23.37■■□□□ 1.33
PSMC6-205ENST00000553899 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
PSMC6-205ENST00000553899 WRNQ14191 1432 aaPredicted RBP eCLIP23.35■■□□□ 1.33
PSMC6-205ENST00000553899 CUX1P39880 1505 aa23.32■■□□□ 1.32
PSMC6-205ENST00000553899 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
PSMC6-205ENST00000553899 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
PSMC6-205ENST00000553899 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
PSMC6-205ENST00000553899 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
PSMC6-205ENST00000553899 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
PSMC6-205ENST00000553899 IFT140Q96RY7 1462 aa23.16■■□□□ 1.3
PSMC6-205ENST00000553899 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
PSMC6-205ENST00000553899 SOGA1O94964 1423 aa23.1■■□□□ 1.29
PSMC6-205ENST00000553899 WDR97A6NE52 1622 aa23.08■■□□□ 1.29
PSMC6-205ENST00000553899 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
PSMC6-205ENST00000553899 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
PSMC6-205ENST00000553899 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
PSMC6-205ENST00000553899 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
PSMC6-205ENST00000553899 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
PSMC6-205ENST00000553899 ABCA5Q8WWZ7 1642 aa22.89■■□□□ 1.25
PSMC6-205ENST00000553899 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
PSMC6-205ENST00000553899 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
PSMC6-205ENST00000553899 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
PSMC6-205ENST00000553899 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
PSMC6-205ENST00000553899 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.251e-12■■■■□ 26.6
PSMC6-205ENST00000553899 GRIN2BQ13224 1484 aa22.82■■□□□ 1.24
PSMC6-205ENST00000553899 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
PSMC6-205ENST00000553899 EEA1Q15075 1411 aa22.78■■□□□ 1.24
PSMC6-205ENST00000553899 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
PSMC6-205ENST00000553899 MAGI1Q96QZ7 1491 aaPredicted RBP22.75■■□□□ 1.23
PSMC6-205ENST00000553899 IGF1RP08069 1367 aa22.7■■□□□ 1.22
PSMC6-205ENST00000553899 CUL7Q14999 1698 aa22.67■■□□□ 1.22
PSMC6-205ENST00000553899 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
PSMC6-205ENST00000553899 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
PSMC6-205ENST00000553899 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
PSMC6-205ENST00000553899 SYNJ2O15056 1496 aa22.63■■□□□ 1.21
PSMC6-205ENST00000553899 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
PSMC6-205ENST00000553899 CSRNP3Q8WYN3 585 aa22.58■■□□□ 1.21
PSMC6-205ENST00000553899 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
PSMC6-205ENST00000553899 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
PSMC6-205ENST00000553899 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
PSMC6-205ENST00000553899 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
PSMC6-205ENST00000553899 CHD1O14646 1710 aa22.5■■□□□ 1.19
PSMC6-205ENST00000553899 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
PSMC6-205ENST00000553899 KIF21BO75037 1637 aa22.45■■□□□ 1.18
PSMC6-205ENST00000553899 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
PSMC6-205ENST00000553899 NUP160Q12769 1436 aa22.42■■□□□ 1.18
PSMC6-205ENST00000553899 FBLN2P98095 1184 aa22.41■■□□□ 1.18
PSMC6-205ENST00000553899 FAM9AQ8IZU1 332 aaPredicted RBP22.38■■□□□ 1.17
PSMC6-205ENST00000553899 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
PSMC6-205ENST00000553899 KIAA0586Q9BVV6 1533 aa22.32■■□□□ 1.16
PSMC6-205ENST00000553899 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms