RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 NISCHQ9Y2I1 1504 aa43.44■■■■■ 4.54
PPP1CA-210ENST00000542876 ABCC9O60706 1549 aa39.03■■■■□ 3.84
PPP1CA-210ENST00000542876 CCDC180Q9P1Z9 1646 aa38.93■■■■□ 3.82
PPP1CA-210ENST00000542876 RB1CC1Q8TDY2 1594 aa37.14■■■■□ 3.54
PPP1CA-210ENST00000542876 NACADO15069 1562 aa36.87■■■■□ 3.49
PPP1CA-210ENST00000542876 DCAF8L2P0C7V8 631 aa36.83■■■■□ 3.49
PPP1CA-210ENST00000542876 DNAJC5BQ9UF47 199 aa36.59■■■■□ 3.45
PPP1CA-210ENST00000542876 PABPN1Q86U42 306 aaKnown RBP eCLIP36.38■■■■□ 3.41
PPP1CA-210ENST00000542876 MYO15BQ96JP2 1530 aa36.35■■■■□ 3.41
PPP1CA-210ENST00000542876 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
PPP1CA-210ENST00000542876 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
PPP1CA-210ENST00000542876 BICRAQ9NZM4 1560 aa35.97■■■■□ 3.35
PPP1CA-210ENST00000542876 DCAF1Q9Y4B6 1507 aa35.88■■■■□ 3.33
PPP1CA-210ENST00000542876 SHROOM4Q9ULL8 1493 aa35.59■■■■□ 3.29
PPP1CA-210ENST00000542876 SCRIBQ14160 1630 aa35.51■■■■□ 3.28
PPP1CA-210ENST00000542876 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
PPP1CA-210ENST00000542876 CECR2Q9BXF3 1484 aa35.18■■■■□ 3.22
PPP1CA-210ENST00000542876 EIF4G1Q04637 1599 aaKnown RBP35.14■■■■□ 3.22
PPP1CA-210ENST00000542876 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
PPP1CA-210ENST00000542876 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.02
PPP1CA-210ENST00000542876 SMARCA2P51531 1590 aa33.87■■■■□ 3.01
PPP1CA-210ENST00000542876 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
PPP1CA-210ENST00000542876 HMGXB3Q12766 1538 aa33.78■■■■□ 3
PPP1CA-210ENST00000542876 ERCC6Q03468 1493 aa33.76■■■■□ 3
PPP1CA-210ENST00000542876 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
PPP1CA-210ENST00000542876 DNAJC5Q9H3Z4 198 aa33.68■■■□□ 2.98
PPP1CA-210ENST00000542876 CUX2O14529 1486 aa33.66■■■□□ 2.98
PPP1CA-210ENST00000542876 BAZ1BQ9UIG0 1483 aaKnown RBP33.64■■■□□ 2.98
PPP1CA-210ENST00000542876 PEG3Q9GZU2 1588 aa33.53■■■□□ 2.96
PPP1CA-210ENST00000542876 NESP48681 1621 aa33.49■■■□□ 2.95
PPP1CA-210ENST00000542876 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
PPP1CA-210ENST00000542876 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
PPP1CA-210ENST00000542876 PDS5BQ9NTI5 1447 aa33.16■■■□□ 2.9
PPP1CA-210ENST00000542876 THOC2Q8NI27 1593 aaKnown RBP33.1■■■□□ 2.89
PPP1CA-210ENST00000542876 CADPSQ9ULU8 1353 aa33.06■■■□□ 2.88
PPP1CA-210ENST00000542876 WIZO95785 1651 aa33.02■■■□□ 2.88
PPP1CA-210ENST00000542876 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
PPP1CA-210ENST00000542876 MRC2Q9UBG0 1479 aa32.83■■■□□ 2.85
PPP1CA-210ENST00000542876 RSF1Q96T23 1441 aaPredicted RBP32.79■■■□□ 2.84
PPP1CA-210ENST00000542876 CEP164Q9UPV0 1460 aa32.71■■■□□ 2.83
PPP1CA-210ENST00000542876 WDR62O43379 1518 aa32.7■■■□□ 2.83
PPP1CA-210ENST00000542876 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
PPP1CA-210ENST00000542876 TOP2AP11388 1531 aaKnown RBP32.66■■■□□ 2.82
PPP1CA-210ENST00000542876 CFTRP13569 1480 aa32.64■■■□□ 2.82
PPP1CA-210ENST00000542876 URB2Q14146 1524 aaKnown RBP32.35■■■□□ 2.77
PPP1CA-210ENST00000542876 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
PPP1CA-210ENST00000542876 TRIM41Q8WV44 630 aa32.25■■■□□ 2.75
PPP1CA-210ENST00000542876 OSCARQ8IYS5 282 aa32.2■■■□□ 2.75
PPP1CA-210ENST00000542876 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
PPP1CA-210ENST00000542876 IFT140Q96RY7 1462 aa32.06■■■□□ 2.72
PPP1CA-210ENST00000542876 TOPBP1Q92547 1522 aa32.01■■■□□ 2.72
PPP1CA-210ENST00000542876 ABCC8Q09428 1581 aa32.01■■■□□ 2.71
PPP1CA-210ENST00000542876 ZNF608Q9ULD9 1512 aaPredicted RBP31.95■■■□□ 2.71
PPP1CA-210ENST00000542876 DNMBPQ6XZF7 1577 aa31.89■■■□□ 2.7
PPP1CA-210ENST00000542876 EIF4G3O43432 1585 aaKnown RBP31.76■■■□□ 2.67
PPP1CA-210ENST00000542876 AQRO60306 1485 aaKnown RBP eCLIP31.7■■■□□ 2.663e-12■■■■■ 48.9
PPP1CA-210ENST00000542876 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
PPP1CA-210ENST00000542876 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
PPP1CA-210ENST00000542876 RIMBP3CA6NJZ7 1639 aa31.64■■■□□ 2.65
PPP1CA-210ENST00000542876 RIMBP3BA6NNM3 1639 aa31.64■■■□□ 2.65
PPP1CA-210ENST00000542876 RIMBP3Q9UFD9 1639 aa31.64■■■□□ 2.65
PPP1CA-210ENST00000542876 FBLN2P98095 1184 aa31.6■■■□□ 2.65
PPP1CA-210ENST00000542876 SOGA1O94964 1423 aa31.59■■■□□ 2.65
PPP1CA-210ENST00000542876 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
PPP1CA-210ENST00000542876 RAD54L2Q9Y4B4 1467 aa31.58■■■□□ 2.65
PPP1CA-210ENST00000542876 TDRD9Q8NDG6 1382 aaKnown RBP31.53■■■□□ 2.64
PPP1CA-210ENST00000542876 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
PPP1CA-210ENST00000542876 CHD1O14646 1710 aa31.47■■■□□ 2.63
PPP1CA-210ENST00000542876 SUPT5HO00267 1087 aaKnown RBP31.44■■■□□ 2.62
PPP1CA-210ENST00000542876 CYB5RLQ6IPT4 315 aa31.44■■■□□ 2.62
PPP1CA-210ENST00000542876 CUX1P39880 1505 aa31.44■■■□□ 2.62
PPP1CA-210ENST00000542876 WDR97A6NE52 1622 aa31.41■■■□□ 2.62
PPP1CA-210ENST00000542876 SNAPC4Q5SXM2 1469 aa31.37■■■□□ 2.61
PPP1CA-210ENST00000542876 CHMP7Q8WUX9 453 aaPredicted RBP31.36■■■□□ 2.61
PPP1CA-210ENST00000542876 GRIN2BQ13224 1484 aa31.32■■■□□ 2.6
PPP1CA-210ENST00000542876 MAGI1Q96QZ7 1491 aaPredicted RBP31.3■■■□□ 2.6
PPP1CA-210ENST00000542876 ARAP1Q96P48 1450 aa31.26■■■□□ 2.59
PPP1CA-210ENST00000542876 SYNJ1O43426 1573 aa31.21■■■□□ 2.59
PPP1CA-210ENST00000542876 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
PPP1CA-210ENST00000542876 GAPVD1Q14C86 1478 aa31.2■■■□□ 2.58
PPP1CA-210ENST00000542876 CLASP1Q7Z460 1538 aa31.16■■■□□ 2.58
PPP1CA-210ENST00000542876 TRHP20396 242 aaPredicted RBP31.14■■■□□ 2.58
PPP1CA-210ENST00000542876 ABCA10Q8WWZ4 1543 aa31.14■■■□□ 2.57
PPP1CA-210ENST00000542876 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.57
PPP1CA-210ENST00000542876 PBRM1Q86U86 1689 aa31.07■■■□□ 2.56
PPP1CA-210ENST00000542876 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
PPP1CA-210ENST00000542876 TOP2BQ02880 1626 aa30.93■■■□□ 2.54
PPP1CA-210ENST00000542876 BIVM-ERCC5R4GMW8 1640 aa30.89■■■□□ 2.54
PPP1CA-210ENST00000542876 GRIN2AQ12879 1464 aa30.89■■■□□ 2.53
PPP1CA-210ENST00000542876 ADAMTS12P58397 1594 aa30.82■■■□□ 2.52
PPP1CA-210ENST00000542876 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
PPP1CA-210ENST00000542876 NUP160Q12769 1436 aa30.77■■■□□ 2.52
PPP1CA-210ENST00000542876 ERICH3Q5RHP9 1530 aa30.75■■■□□ 2.51
PPP1CA-210ENST00000542876 CEP170Q5SW79 1584 aa30.72■■■□□ 2.51
PPP1CA-210ENST00000542876 ERCC6L2Q5T890 1561 aa30.65■■■□□ 2.5
PPP1CA-210ENST00000542876 SHROOM2Q13796 1616 aa30.58■■■□□ 2.49
PPP1CA-210ENST00000542876 JPH4Q96JJ6 628 aa30.53■■■□□ 2.48
PPP1CA-210ENST00000542876 PRG4Q92954 1404 aaPredicted RBP30.53■■■□□ 2.48
PPP1CA-210ENST00000542876 KIF27Q86VH2 1401 aa30.42■■■□□ 2.46
PPP1CA-210ENST00000542876 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms