RNA–Protein interactions for RNA: ENST00000411704.1

NCBP2-202, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 5

Gene NCBP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-202ENST00000411704 NISCHQ9Y2I1 1504 aa39.23■■■■□ 3.87
NCBP2-202ENST00000411704 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
NCBP2-202ENST00000411704 ABCC9O60706 1549 aa34.4■■■■□ 3.1
NCBP2-202ENST00000411704 RB1CC1Q8TDY2 1594 aa33.02■■■□□ 2.88
NCBP2-202ENST00000411704 NACADO15069 1562 aa32.93■■■□□ 2.86
NCBP2-202ENST00000411704 DCAF8L2P0C7V8 631 aa32.89■■■□□ 2.86
NCBP2-202ENST00000411704 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
NCBP2-202ENST00000411704 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
NCBP2-202ENST00000411704 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.78
NCBP2-202ENST00000411704 UNC13AQ9UPW8 1703 aa32.25■■■□□ 2.75
NCBP2-202ENST00000411704 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
NCBP2-202ENST00000411704 BICRAQ9NZM4 1560 aa31.99■■■□□ 2.71
NCBP2-202ENST00000411704 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
NCBP2-202ENST00000411704 DNAJC5BQ9UF47 199 aa31.71■■■□□ 2.67
NCBP2-202ENST00000411704 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
NCBP2-202ENST00000411704 EIF4G1Q04637 1599 aaKnown RBP31.18■■■□□ 2.58
NCBP2-202ENST00000411704 CC2D2AQ9P2K1 1620 aa31.11■■■□□ 2.57
NCBP2-202ENST00000411704 CECR2Q9BXF3 1484 aa30.94■■■□□ 2.54
NCBP2-202ENST00000411704 SMARCA4P51532 1647 aa30.48■■■□□ 2.47
NCBP2-202ENST00000411704 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
NCBP2-202ENST00000411704 NCAPD3P42695 1498 aa30.38■■■□□ 2.45
NCBP2-202ENST00000411704 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
NCBP2-202ENST00000411704 SMARCA2P51531 1590 aa30.33■■■□□ 2.45
NCBP2-202ENST00000411704 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
NCBP2-202ENST00000411704 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
NCBP2-202ENST00000411704 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
NCBP2-202ENST00000411704 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
NCBP2-202ENST00000411704 WIZO95785 1651 aa29.89■■■□□ 2.38
NCBP2-202ENST00000411704 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
NCBP2-202ENST00000411704 NESP48681 1621 aa29.7■■■□□ 2.34
NCBP2-202ENST00000411704 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
NCBP2-202ENST00000411704 LAMC3Q9Y6N6 1575 aa29.62■■■□□ 2.33
NCBP2-202ENST00000411704 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
NCBP2-202ENST00000411704 CADPSQ9ULU8 1353 aa29.49■■■□□ 2.31
NCBP2-202ENST00000411704 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
NCBP2-202ENST00000411704 CUX2O14529 1486 aa29.43■■■□□ 2.3
NCBP2-202ENST00000411704 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
NCBP2-202ENST00000411704 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
NCBP2-202ENST00000411704 CFTRP13569 1480 aa29.27■■■□□ 2.28
NCBP2-202ENST00000411704 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
NCBP2-202ENST00000411704 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
NCBP2-202ENST00000411704 CEP164Q9UPV0 1460 aa29.15■■■□□ 2.26
NCBP2-202ENST00000411704 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.26
NCBP2-202ENST00000411704 PRDM2Q13029 1718 aa29.05■■■□□ 2.24
NCBP2-202ENST00000411704 WDR62O43379 1518 aa29.04■■■□□ 2.24
NCBP2-202ENST00000411704 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
NCBP2-202ENST00000411704 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
NCBP2-202ENST00000411704 DNAJC5Q9H3Z4 198 aa28.74■■■□□ 2.19
NCBP2-202ENST00000411704 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
NCBP2-202ENST00000411704 TOPBP1Q92547 1522 aa28.66■■■□□ 2.18
NCBP2-202ENST00000411704 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
NCBP2-202ENST00000411704 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
NCBP2-202ENST00000411704 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
NCBP2-202ENST00000411704 ZNF608Q9ULD9 1512 aaPredicted RBP28.4■■■□□ 2.14
NCBP2-202ENST00000411704 CUX1P39880 1505 aa28.36■■■□□ 2.13
NCBP2-202ENST00000411704 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
NCBP2-202ENST00000411704 FGD5Q6ZNL6 1462 aa28.31■■■□□ 2.12
NCBP2-202ENST00000411704 EIF4G3O43432 1585 aaKnown RBP28.3■■■□□ 2.12
NCBP2-202ENST00000411704 SOGA1O94964 1423 aa28.3■■■□□ 2.12
NCBP2-202ENST00000411704 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
NCBP2-202ENST00000411704 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.116e-6■□□□□ 8.5
NCBP2-202ENST00000411704 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
NCBP2-202ENST00000411704 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
NCBP2-202ENST00000411704 WDR97A6NE52 1622 aa28.14■■■□□ 2.1
NCBP2-202ENST00000411704 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
NCBP2-202ENST00000411704 TOP2BQ02880 1626 aa28.09■■■□□ 2.09
NCBP2-202ENST00000411704 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
NCBP2-202ENST00000411704 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
NCBP2-202ENST00000411704 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
NCBP2-202ENST00000411704 GRIN2BQ13224 1484 aa27.99■■■□□ 2.07
NCBP2-202ENST00000411704 CHD1O14646 1710 aa27.98■■■□□ 2.07
NCBP2-202ENST00000411704 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
NCBP2-202ENST00000411704 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
NCBP2-202ENST00000411704 FBLN2P98095 1184 aa27.96■■■□□ 2.07
NCBP2-202ENST00000411704 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
NCBP2-202ENST00000411704 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
NCBP2-202ENST00000411704 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
NCBP2-202ENST00000411704 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
NCBP2-202ENST00000411704 SYNJ2O15056 1496 aa27.83■■■□□ 2.05
NCBP2-202ENST00000411704 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
NCBP2-202ENST00000411704 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
NCBP2-202ENST00000411704 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
NCBP2-202ENST00000411704 TRIM41Q8WV44 630 aa27.74■■■□□ 2.03
NCBP2-202ENST00000411704 ARHGEF11O15085 1522 aa27.72■■■□□ 2.03
NCBP2-202ENST00000411704 ERICH3Q5RHP9 1530 aa27.7■■■□□ 2.02
NCBP2-202ENST00000411704 ADAMTS12P58397 1594 aa27.68■■■□□ 2.02
NCBP2-202ENST00000411704 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
NCBP2-202ENST00000411704 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
NCBP2-202ENST00000411704 GRIN2AQ12879 1464 aa27.62■■■□□ 2.01
NCBP2-202ENST00000411704 KIF27Q86VH2 1401 aa27.56■■■□□ 2
NCBP2-202ENST00000411704 NUP160Q12769 1436 aa27.5■■□□□ 1.99
NCBP2-202ENST00000411704 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
NCBP2-202ENST00000411704 CYB5RLQ6IPT4 315 aa27.48■■□□□ 1.99
NCBP2-202ENST00000411704 ARAP1Q96P48 1450 aa27.47■■□□□ 1.99
NCBP2-202ENST00000411704 IGF1RP08069 1367 aa27.46■■□□□ 1.99
NCBP2-202ENST00000411704 CUL7Q14999 1698 aa27.42■■□□□ 1.98
NCBP2-202ENST00000411704 SHROOM2Q13796 1616 aa27.31■■□□□ 1.96
NCBP2-202ENST00000411704 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
NCBP2-202ENST00000411704 RUSC2Q8N2Y8 1516 aa27.27■■□□□ 1.96
NCBP2-202ENST00000411704 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms