RNA–Protein interactions for RNA: ENST00000479647.1

NCBP2-212, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 3

Gene NCBP2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-212ENST00000479647 NISCHQ9Y2I1 1504 aa28.85■■■□□ 2.21
NCBP2-212ENST00000479647 ABCC9O60706 1549 aa26.41■■□□□ 1.82
NCBP2-212ENST00000479647 CCDC180Q9P1Z9 1646 aa26.07■■□□□ 1.76
NCBP2-212ENST00000479647 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
NCBP2-212ENST00000479647 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
NCBP2-212ENST00000479647 NACADO15069 1562 aa24.68■■□□□ 1.54
NCBP2-212ENST00000479647 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
NCBP2-212ENST00000479647 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
NCBP2-212ENST00000479647 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
NCBP2-212ENST00000479647 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
NCBP2-212ENST00000479647 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
NCBP2-212ENST00000479647 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
NCBP2-212ENST00000479647 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
NCBP2-212ENST00000479647 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
NCBP2-212ENST00000479647 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
NCBP2-212ENST00000479647 CECR2Q9BXF3 1484 aa23.8■■□□□ 1.4
NCBP2-212ENST00000479647 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
NCBP2-212ENST00000479647 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
NCBP2-212ENST00000479647 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
NCBP2-212ENST00000479647 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
NCBP2-212ENST00000479647 CUX2O14529 1486 aa22.83■■□□□ 1.25
NCBP2-212ENST00000479647 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
NCBP2-212ENST00000479647 ATAD2BQ9ULI0 1458 aa22.67■■□□□ 1.22
NCBP2-212ENST00000479647 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
NCBP2-212ENST00000479647 SMARCA2P51531 1590 aa22.62■■□□□ 1.21
NCBP2-212ENST00000479647 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
NCBP2-212ENST00000479647 NESP48681 1621 aa22.6■■□□□ 1.21
NCBP2-212ENST00000479647 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
NCBP2-212ENST00000479647 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
NCBP2-212ENST00000479647 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
NCBP2-212ENST00000479647 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
NCBP2-212ENST00000479647 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
NCBP2-212ENST00000479647 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.17
NCBP2-212ENST00000479647 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
NCBP2-212ENST00000479647 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
NCBP2-212ENST00000479647 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
NCBP2-212ENST00000479647 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
NCBP2-212ENST00000479647 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
NCBP2-212ENST00000479647 WIZO95785 1651 aa22.04■■□□□ 1.12
NCBP2-212ENST00000479647 WDR62O43379 1518 aa22.01■■□□□ 1.11
NCBP2-212ENST00000479647 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
NCBP2-212ENST00000479647 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
NCBP2-212ENST00000479647 CFTRP13569 1480 aa21.74■■□□□ 1.07
NCBP2-212ENST00000479647 OSCARQ8IYS5 282 aa21.73■■□□□ 1.07
NCBP2-212ENST00000479647 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.07
NCBP2-212ENST00000479647 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
NCBP2-212ENST00000479647 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
NCBP2-212ENST00000479647 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
NCBP2-212ENST00000479647 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.04
NCBP2-212ENST00000479647 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.04
NCBP2-212ENST00000479647 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.04
NCBP2-212ENST00000479647 ZNF608Q9ULD9 1512 aaPredicted RBP21.5■■□□□ 1.03
NCBP2-212ENST00000479647 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
NCBP2-212ENST00000479647 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
NCBP2-212ENST00000479647 TOPBP1Q92547 1522 aa21.41■■□□□ 1.02
NCBP2-212ENST00000479647 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
NCBP2-212ENST00000479647 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
NCBP2-212ENST00000479647 CHD1O14646 1710 aa21.36■■□□□ 1.01
NCBP2-212ENST00000479647 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
NCBP2-212ENST00000479647 ABCC8Q09428 1581 aa21.3■■□□□ 1
NCBP2-212ENST00000479647 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
NCBP2-212ENST00000479647 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.996e-6■□□□□ 8.5
NCBP2-212ENST00000479647 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
NCBP2-212ENST00000479647 FBLN2P98095 1184 aa21.23■□□□□ 0.99
NCBP2-212ENST00000479647 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
NCBP2-212ENST00000479647 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
NCBP2-212ENST00000479647 POLA1P09884 1462 aaPredicted RBP21.17■□□□□ 0.98
NCBP2-212ENST00000479647 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
NCBP2-212ENST00000479647 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
NCBP2-212ENST00000479647 SOGA1O94964 1423 aa21.05■□□□□ 0.96
NCBP2-212ENST00000479647 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
NCBP2-212ENST00000479647 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
NCBP2-212ENST00000479647 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
NCBP2-212ENST00000479647 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
NCBP2-212ENST00000479647 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
NCBP2-212ENST00000479647 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
NCBP2-212ENST00000479647 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
NCBP2-212ENST00000479647 CUX1P39880 1505 aa20.94■□□□□ 0.94
NCBP2-212ENST00000479647 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
NCBP2-212ENST00000479647 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
NCBP2-212ENST00000479647 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
NCBP2-212ENST00000479647 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
NCBP2-212ENST00000479647 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
NCBP2-212ENST00000479647 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
NCBP2-212ENST00000479647 ABCA10Q8WWZ4 1543 aa20.71■□□□□ 0.91
NCBP2-212ENST00000479647 ERCC6L2Q5T890 1561 aa20.69■□□□□ 0.9
NCBP2-212ENST00000479647 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
NCBP2-212ENST00000479647 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
NCBP2-212ENST00000479647 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
NCBP2-212ENST00000479647 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
NCBP2-212ENST00000479647 NUP160Q12769 1436 aa20.56■□□□□ 0.88
NCBP2-212ENST00000479647 SHROOM2Q13796 1616 aa20.55■□□□□ 0.88
NCBP2-212ENST00000479647 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
NCBP2-212ENST00000479647 KIF13AQ9H1H9 1805 aa20.53■□□□□ 0.88
NCBP2-212ENST00000479647 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
NCBP2-212ENST00000479647 TOP2BQ02880 1626 aa20.52■□□□□ 0.88
NCBP2-212ENST00000479647 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
NCBP2-212ENST00000479647 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
NCBP2-212ENST00000479647 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
NCBP2-212ENST00000479647 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms