RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 NISCHQ9Y2I1 1504 aa38.51■■■■□ 3.76
PPP1CA-211ENST00000546202 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.04
PPP1CA-211ENST00000546202 ABCC9O60706 1549 aa33.15■■■□□ 2.9
PPP1CA-211ENST00000546202 ZCCHC6Q5VYS8 1495 aaKnown RBP32.23■■■□□ 2.75
PPP1CA-211ENST00000546202 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
PPP1CA-211ENST00000546202 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
PPP1CA-211ENST00000546202 NACADO15069 1562 aa31.77■■■□□ 2.68
PPP1CA-211ENST00000546202 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
PPP1CA-211ENST00000546202 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
PPP1CA-211ENST00000546202 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.66
PPP1CA-211ENST00000546202 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
PPP1CA-211ENST00000546202 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
PPP1CA-211ENST00000546202 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
PPP1CA-211ENST00000546202 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
PPP1CA-211ENST00000546202 BICRAQ9NZM4 1560 aa30.7■■■□□ 2.5
PPP1CA-211ENST00000546202 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
PPP1CA-211ENST00000546202 CC2D2AQ9P2K1 1620 aa29.84■■■□□ 2.37
PPP1CA-211ENST00000546202 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
PPP1CA-211ENST00000546202 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
PPP1CA-211ENST00000546202 SMARCA4P51532 1647 aa29.76■■■□□ 2.35
PPP1CA-211ENST00000546202 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
PPP1CA-211ENST00000546202 RSF1Q96T23 1441 aaPredicted RBP29.57■■■□□ 2.32
PPP1CA-211ENST00000546202 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
PPP1CA-211ENST00000546202 PEG3Q9GZU2 1588 aa29.48■■■□□ 2.31
PPP1CA-211ENST00000546202 WIZO95785 1651 aa29.43■■■□□ 2.3
PPP1CA-211ENST00000546202 SMARCA2P51531 1590 aa29.41■■■□□ 2.3
PPP1CA-211ENST00000546202 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
PPP1CA-211ENST00000546202 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
PPP1CA-211ENST00000546202 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
PPP1CA-211ENST00000546202 SUPT5HO00267 1087 aaKnown RBP29.22■■■□□ 2.27
PPP1CA-211ENST00000546202 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
PPP1CA-211ENST00000546202 TOP2AP11388 1531 aaKnown RBP29.14■■■□□ 2.25
PPP1CA-211ENST00000546202 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
PPP1CA-211ENST00000546202 CUX2O14529 1486 aa28.71■■■□□ 2.19
PPP1CA-211ENST00000546202 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
PPP1CA-211ENST00000546202 CADPSQ9ULU8 1353 aa28.45■■■□□ 2.14
PPP1CA-211ENST00000546202 CFTRP13569 1480 aa28.44■■■□□ 2.14
PPP1CA-211ENST00000546202 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
PPP1CA-211ENST00000546202 PRDM2Q13029 1718 aa28.39■■■□□ 2.14
PPP1CA-211ENST00000546202 NESP48681 1621 aa28.38■■■□□ 2.13
PPP1CA-211ENST00000546202 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
PPP1CA-211ENST00000546202 FANCD2Q9BXW9 1451 aa28.13■■■□□ 2.09
PPP1CA-211ENST00000546202 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
PPP1CA-211ENST00000546202 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
PPP1CA-211ENST00000546202 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
PPP1CA-211ENST00000546202 TRIM41Q8WV44 630 aa27.97■■■□□ 2.07
PPP1CA-211ENST00000546202 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
PPP1CA-211ENST00000546202 MRC2Q9UBG0 1479 aa27.87■■■□□ 2.05
PPP1CA-211ENST00000546202 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
PPP1CA-211ENST00000546202 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
PPP1CA-211ENST00000546202 CUX1P39880 1505 aa27.82■■■□□ 2.04
PPP1CA-211ENST00000546202 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
PPP1CA-211ENST00000546202 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
PPP1CA-211ENST00000546202 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
PPP1CA-211ENST00000546202 WDR62O43379 1518 aa27.77■■■□□ 2.04
PPP1CA-211ENST00000546202 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
PPP1CA-211ENST00000546202 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
PPP1CA-211ENST00000546202 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
PPP1CA-211ENST00000546202 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
PPP1CA-211ENST00000546202 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
PPP1CA-211ENST00000546202 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.99
PPP1CA-211ENST00000546202 SOGA1O94964 1423 aa27.44■■□□□ 1.98
PPP1CA-211ENST00000546202 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
PPP1CA-211ENST00000546202 RAD54L2Q9Y4B4 1467 aa27.43■■□□□ 1.98
PPP1CA-211ENST00000546202 WDR97A6NE52 1622 aa27.42■■□□□ 1.98
PPP1CA-211ENST00000546202 IFT140Q96RY7 1462 aa27.42■■□□□ 1.98
PPP1CA-211ENST00000546202 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
PPP1CA-211ENST00000546202 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
PPP1CA-211ENST00000546202 ZNF608Q9ULD9 1512 aaPredicted RBP27.24■■□□□ 1.95
PPP1CA-211ENST00000546202 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
PPP1CA-211ENST00000546202 EIF4G3O43432 1585 aaKnown RBP27.2■■□□□ 1.94
PPP1CA-211ENST00000546202 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
PPP1CA-211ENST00000546202 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
PPP1CA-211ENST00000546202 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
PPP1CA-211ENST00000546202 AQRO60306 1485 aaKnown RBP eCLIP27.15■■□□□ 1.943e-12■■■■■ 48.9
PPP1CA-211ENST00000546202 EEA1Q15075 1411 aa27.15■■□□□ 1.94
PPP1CA-211ENST00000546202 PBRM1Q86U86 1689 aa27.13■■□□□ 1.93
PPP1CA-211ENST00000546202 ERICH3Q5RHP9 1530 aa27.07■■□□□ 1.92
PPP1CA-211ENST00000546202 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
PPP1CA-211ENST00000546202 RIMBP3CA6NJZ7 1639 aa27.02■■□□□ 1.92
PPP1CA-211ENST00000546202 RIMBP3BA6NNM3 1639 aa27.02■■□□□ 1.92
PPP1CA-211ENST00000546202 RIMBP3Q9UFD9 1639 aa27.02■■□□□ 1.92
PPP1CA-211ENST00000546202 IGF1RP08069 1367 aa27.01■■□□□ 1.91
PPP1CA-211ENST00000546202 FAM9AQ8IZU1 332 aaPredicted RBP26.98■■□□□ 1.91
PPP1CA-211ENST00000546202 CUL7Q14999 1698 aa26.98■■□□□ 1.91
PPP1CA-211ENST00000546202 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
PPP1CA-211ENST00000546202 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
PPP1CA-211ENST00000546202 MAGI1Q96QZ7 1491 aaPredicted RBP26.93■■□□□ 1.9
PPP1CA-211ENST00000546202 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
PPP1CA-211ENST00000546202 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
PPP1CA-211ENST00000546202 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
PPP1CA-211ENST00000546202 CYB5RLQ6IPT4 315 aa26.88■■□□□ 1.89
PPP1CA-211ENST00000546202 CARMIL1Q5VZK9 1371 aa26.86■■□□□ 1.89
PPP1CA-211ENST00000546202 FHAD1B1AJZ9 1412 aa26.86■■□□□ 1.89
PPP1CA-211ENST00000546202 KIF21BO75037 1637 aa26.86■■□□□ 1.89
PPP1CA-211ENST00000546202 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
PPP1CA-211ENST00000546202 RAPGEF2Q9Y4G8 1499 aa26.8■■□□□ 1.88
PPP1CA-211ENST00000546202 CHD1O14646 1710 aa26.76■■□□□ 1.88
PPP1CA-211ENST00000546202 TRHP20396 242 aaPredicted RBP26.73■■□□□ 1.87
PPP1CA-211ENST00000546202 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms