RNA–Protein interactions for RNA: ENST00000464329.1

CD53-202, Transcript of CD53 molecule, humanhuman

TSL 2

Gene CD53, Length 416 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-202ENST00000464329 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
CD53-202ENST00000464329 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
CD53-202ENST00000464329 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
CD53-202ENST00000464329 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
CD53-202ENST00000464329 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
CD53-202ENST00000464329 FOXD1Q16676 465 aa14□□□□□ -0.17
CD53-202ENST00000464329 ADRA2BP18089 450 aa13.62□□□□□ -0.23
CD53-202ENST00000464329 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
CD53-202ENST00000464329 PIAS4Q8N2W9 510 aaPredicted RBP13.23□□□□□ -0.29
CD53-202ENST00000464329 MSH5O43196 834 aa12.78□□□□□ -0.36
CD53-202ENST00000464329 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
CD53-202ENST00000464329 KCNA4P22459 653 aa12.53□□□□□ -0.4
CD53-202ENST00000464329 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
CD53-202ENST00000464329 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
CD53-202ENST00000464329 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
CD53-202ENST00000464329 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
CD53-202ENST00000464329 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
CD53-202ENST00000464329 NISCHQ9Y2I1 1504 aa12.08□□□□□ -0.48
CD53-202ENST00000464329 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
CD53-202ENST00000464329 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
CD53-202ENST00000464329 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
CD53-202ENST00000464329 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
CD53-202ENST00000464329 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
CD53-202ENST00000464329 DNAJC5BQ9UF47 199 aa11.67□□□□□ -0.54
CD53-202ENST00000464329 DCAF8L1A6NGE4 600 aa11.58□□□□□ -0.56
CD53-202ENST00000464329 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
CD53-202ENST00000464329 ZBTB22O15209 634 aa11.54□□□□□ -0.56
CD53-202ENST00000464329 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
CD53-202ENST00000464329 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
CD53-202ENST00000464329 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
CD53-202ENST00000464329 ABCC9O60706 1549 aa11.34□□□□□ -0.59
CD53-202ENST00000464329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
CD53-202ENST00000464329 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
CD53-202ENST00000464329 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
CD53-202ENST00000464329 RNF39Q9H2S5 420 aa10.99□□□□□ -0.65
CD53-202ENST00000464329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.98□□□□□ -0.65
CD53-202ENST00000464329 ATXN8OSP0DMR3 200 aa10.98□□□□□ -0.65
CD53-202ENST00000464329 HNRNPUL2Q1KMD3 747 aaKnown RBP10.98□□□□□ -0.65
CD53-202ENST00000464329 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
CD53-202ENST00000464329 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
CD53-202ENST00000464329 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
CD53-202ENST00000464329 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
CD53-202ENST00000464329 APLP2Q06481 763 aa10.82□□□□□ -0.68
CD53-202ENST00000464329 CCDC180Q9P1Z9 1646 aa10.82□□□□□ -0.68
CD53-202ENST00000464329 CAPN15O75808 1086 aa10.77□□□□□ -0.69
CD53-202ENST00000464329 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
CD53-202ENST00000464329 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
CD53-202ENST00000464329 DCAF8L2P0C7V8 631 aa10.69□□□□□ -0.7
CD53-202ENST00000464329 CACNB1Q02641 598 aaPredicted RBP10.63□□□□□ -0.71
CD53-202ENST00000464329 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
CD53-202ENST00000464329 POLA2Q14181 598 aa10.61□□□□□ -0.71
CD53-202ENST00000464329 ABCB7O75027 752 aa10.6□□□□□ -0.71
CD53-202ENST00000464329 DSG3P32926 999 aa10.54□□□□□ -0.72
CD53-202ENST00000464329 RB1CC1Q8TDY2 1594 aa10.54□□□□□ -0.72
CD53-202ENST00000464329 MKRN4PQ13434 485 aaPredicted RBP10.47□□□□□ -0.73
CD53-202ENST00000464329 FKBP8Q14318 412 aa10.46□□□□□ -0.73
CD53-202ENST00000464329 FBLN2P98095 1184 aa10.42□□□□□ -0.74
CD53-202ENST00000464329 NACADO15069 1562 aa10.38□□□□□ -0.75
CD53-202ENST00000464329 ZBTB12Q9Y330 459 aaPredicted RBP10.35□□□□□ -0.75
CD53-202ENST00000464329 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
CD53-202ENST00000464329 OSCARQ8IYS5 282 aa10.25□□□□□ -0.77
CD53-202ENST00000464329 CECR2Q9BXF3 1484 aa10.19□□□□□ -0.78
CD53-202ENST00000464329 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
CD53-202ENST00000464329 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
CD53-202ENST00000464329 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
CD53-202ENST00000464329 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
CD53-202ENST00000464329 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
CD53-202ENST00000464329 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
CD53-202ENST00000464329 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
CD53-202ENST00000464329 CC2D2AQ9P2K1 1620 aa10.11□□□□□ -0.79
CD53-202ENST00000464329 PROM2Q8N271 834 aa10.1□□□□□ -0.79
CD53-202ENST00000464329 SSUH2Q9Y2M2 353 aa10.06□□□□□ -0.8
CD53-202ENST00000464329 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
CD53-202ENST00000464329 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
CD53-202ENST00000464329 EIF4G1Q04637 1599 aaKnown RBP10.01□□□□□ -0.81
CD53-202ENST00000464329 FBXO3Q9UK99 471 aa9.98□□□□□ -0.81
CD53-202ENST00000464329 RBM42Q9BTD8 480 aaKnown RBP9.97□□□□□ -0.81
CD53-202ENST00000464329 SHROOM4Q9ULL8 1493 aa9.96□□□□□ -0.82
CD53-202ENST00000464329 ZCCHC6Q5VYS8 1495 aaKnown RBP9.92□□□□□ -0.82
CD53-202ENST00000464329 AKT1S1Q96B36 256 aa9.9□□□□□ -0.82
CD53-202ENST00000464329 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
CD53-202ENST00000464329 REM2Q8IYK8 340 aaPredicted RBP9.85□□□□□ -0.83
CD53-202ENST00000464329 DCAF1Q9Y4B6 1507 aa9.85□□□□□ -0.83
CD53-202ENST00000464329 ERCC6Q03468 1493 aa9.83□□□□□ -0.84
CD53-202ENST00000464329 STAG3Q9UJ98 1225 aa9.82□□□□□ -0.84
CD53-202ENST00000464329 CLEC11AQ9Y240 323 aa9.81□□□□□ -0.84
CD53-202ENST00000464329 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
CD53-202ENST00000464329 SPDYE1Q8NFV5 336 aaPredicted RBP9.79□□□□□ -0.84
CD53-202ENST00000464329 TRIM41Q8WV44 630 aa9.78□□□□□ -0.84
CD53-202ENST00000464329 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
CD53-202ENST00000464329 MIER1Q8N108 512 aa9.76□□□□□ -0.85
CD53-202ENST00000464329 CUX2O14529 1486 aa9.75□□□□□ -0.85
CD53-202ENST00000464329 PLCD3Q8N3E9 789 aa9.75□□□□□ -0.85
CD53-202ENST00000464329 PITPNM1O00562 1244 aa9.74□□□□□ -0.85
CD53-202ENST00000464329 AMER1Q5JTC6 1135 aaPredicted RBP9.73□□□□□ -0.85
CD53-202ENST00000464329 PRR29P0C7W0 189 aa9.71□□□□□ -0.86
CD53-202ENST00000464329 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
CD53-202ENST00000464329 PLEKHG5O94827 1062 aa9.63□□□□□ -0.87
CD53-202ENST00000464329 CREBZFQ9NS37 354 aa9.63□□□□□ -0.87
CD53-202ENST00000464329 NESP48681 1621 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms