RNA–Protein interactions for RNA: ENST00000497404.1

CD53-205, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 917 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-205ENST00000497404 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
CD53-205ENST00000497404 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
CD53-205ENST00000497404 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
CD53-205ENST00000497404 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
CD53-205ENST00000497404 FOXD1Q16676 465 aa13.24□□□□□ -0.29
CD53-205ENST00000497404 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
CD53-205ENST00000497404 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
CD53-205ENST00000497404 ADRA2BP18089 450 aa12.53□□□□□ -0.4
CD53-205ENST00000497404 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
CD53-205ENST00000497404 MSH5O43196 834 aa12.49□□□□□ -0.41
CD53-205ENST00000497404 PIAS4Q8N2W9 510 aaPredicted RBP12.39□□□□□ -0.43
CD53-205ENST00000497404 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
CD53-205ENST00000497404 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
CD53-205ENST00000497404 NISCHQ9Y2I1 1504 aa11.49□□□□□ -0.57
CD53-205ENST00000497404 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
CD53-205ENST00000497404 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
CD53-205ENST00000497404 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
CD53-205ENST00000497404 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
CD53-205ENST00000497404 ABCC9O60706 1549 aa11.3□□□□□ -0.6
CD53-205ENST00000497404 KCNA4P22459 653 aa11.21□□□□□ -0.61
CD53-205ENST00000497404 DNAJC5BQ9UF47 199 aa11.21□□□□□ -0.61
CD53-205ENST00000497404 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
CD53-205ENST00000497404 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
CD53-205ENST00000497404 HOXD11P31277 338 aaPredicted RBP11.07□□□□□ -0.64
CD53-205ENST00000497404 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
CD53-205ENST00000497404 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
CD53-205ENST00000497404 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
CD53-205ENST00000497404 SLC4A1APQ9BWU0 796 aaKnown RBP10.71□□□□□ -0.69
CD53-205ENST00000497404 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
CD53-205ENST00000497404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.53□□□□□ -0.72
CD53-205ENST00000497404 CCDC180Q9P1Z9 1646 aa10.51□□□□□ -0.73
CD53-205ENST00000497404 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
CD53-205ENST00000497404 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
CD53-205ENST00000497404 C1QBPQ07021 282 aaKnown RBP10.45□□□□□ -0.74
CD53-205ENST00000497404 FOXD4L1Q9NU39 408 aa10.41□□□□□ -0.74
CD53-205ENST00000497404 RB1CC1Q8TDY2 1594 aa10.37□□□□□ -0.75
CD53-205ENST00000497404 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
CD53-205ENST00000497404 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
CD53-205ENST00000497404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.29□□□□□ -0.76
CD53-205ENST00000497404 ZBTB22O15209 634 aa10.29□□□□□ -0.76
CD53-205ENST00000497404 HNRNPUL2Q1KMD3 747 aaKnown RBP10.29□□□□□ -0.76
CD53-205ENST00000497404 EHMT2Q96KQ7 1210 aa10.27□□□□□ -0.77
CD53-205ENST00000497404 APLP2Q06481 763 aa10.23□□□□□ -0.77
CD53-205ENST00000497404 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
CD53-205ENST00000497404 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
CD53-205ENST00000497404 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
CD53-205ENST00000497404 CECR2Q9BXF3 1484 aa10.21□□□□□ -0.78
CD53-205ENST00000497404 UNC13AQ9UPW8 1703 aa10.13□□□□□ -0.79
CD53-205ENST00000497404 NACADO15069 1562 aa10.12□□□□□ -0.79
CD53-205ENST00000497404 CC2D2AQ9P2K1 1620 aa10.11□□□□□ -0.79
CD53-205ENST00000497404 ATXN8OSP0DMR3 200 aa10.1□□□□□ -0.79
CD53-205ENST00000497404 TRIM41Q8WV44 630 aa10.1□□□□□ -0.79
CD53-205ENST00000497404 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
CD53-205ENST00000497404 CAPN15O75808 1086 aa10.03□□□□□ -0.8
CD53-205ENST00000497404 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
CD53-205ENST00000497404 SPINK5Q9NQ38 1064 aaPredicted RBP10.02□□□□□ -0.81
CD53-205ENST00000497404 POTEHQ6S545 545 aa9.98□□□□□ -0.81
CD53-205ENST00000497404 TRHP20396 242 aaPredicted RBP9.94□□□□□ -0.82
CD53-205ENST00000497404 ATF5Q9Y2D1 282 aaPredicted RBP9.92□□□□□ -0.82
CD53-205ENST00000497404 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
CD53-205ENST00000497404 CUX2O14529 1486 aa9.9□□□□□ -0.83
CD53-205ENST00000497404 DSG3P32926 999 aa9.88□□□□□ -0.83
CD53-205ENST00000497404 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
CD53-205ENST00000497404 ABCB7O75027 752 aa9.79□□□□□ -0.84
CD53-205ENST00000497404 POLA2Q14181 598 aa9.78□□□□□ -0.84
CD53-205ENST00000497404 SHROOM4Q9ULL8 1493 aa9.78□□□□□ -0.84
CD53-205ENST00000497404 ZBTB12Q9Y330 459 aaPredicted RBP9.73□□□□□ -0.85
CD53-205ENST00000497404 MYO15BQ96JP2 1530 aa9.69□□□□□ -0.86
CD53-205ENST00000497404 SCRIBQ14160 1630 aa9.67□□□□□ -0.86
CD53-205ENST00000497404 FBLN2P98095 1184 aa9.63□□□□□ -0.87
CD53-205ENST00000497404 NESP48681 1621 aa9.53□□□□□ -0.88
CD53-205ENST00000497404 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
CD53-205ENST00000497404 RBM42Q9BTD8 480 aaKnown RBP9.5□□□□□ -0.89
CD53-205ENST00000497404 OSCARQ8IYS5 282 aa9.46□□□□□ -0.9
CD53-205ENST00000497404 THOC2Q8NI27 1593 aaKnown RBP9.45□□□□□ -0.9
CD53-205ENST00000497404 SPDYE2BA6NHP3 402 aa9.43□□□□□ -0.9
CD53-205ENST00000497404 SPDYE6P0CI01 402 aa9.43□□□□□ -0.9
CD53-205ENST00000497404 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
CD53-205ENST00000497404 SMARCA2P51531 1590 aa9.42□□□□□ -0.9
CD53-205ENST00000497404 NCAPD3P42695 1498 aa9.37□□□□□ -0.91
CD53-205ENST00000497404 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
CD53-205ENST00000497404 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
CD53-205ENST00000497404 ZCCHC6Q5VYS8 1495 aaKnown RBP9.35□□□□□ -0.91
CD53-205ENST00000497404 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
CD53-205ENST00000497404 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
CD53-205ENST00000497404 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
CD53-205ENST00000497404 RIMBP3CA6NJZ7 1639 aa9.34□□□□□ -0.91
CD53-205ENST00000497404 RIMBP3BA6NNM3 1639 aa9.34□□□□□ -0.91
CD53-205ENST00000497404 RIMBP3Q9UFD9 1639 aa9.34□□□□□ -0.91
CD53-205ENST00000497404 CYB5RLQ6IPT4 315 aa9.33□□□□□ -0.92
CD53-205ENST00000497404 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
CD53-205ENST00000497404 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
CD53-205ENST00000497404 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
CD53-205ENST00000497404 KIF21AQ7Z4S6 1674 aa9.32□□□□□ -0.92
CD53-205ENST00000497404 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
CD53-205ENST00000497404 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
CD53-205ENST00000497404 FKBP8Q14318 412 aa9.25□□□□□ -0.93
CD53-205ENST00000497404 LAMC3Q9Y6N6 1575 aa9.24□□□□□ -0.93
CD53-205ENST00000497404 ARHGEF11O15085 1522 aa9.24□□□□□ -0.93
CD53-205ENST00000497404 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms