RNA–Protein interactions for RNA: ENST00000468923.5

NCBP2-211, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 2

Gene NCBP2, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-211ENST00000468923 NISCHQ9Y2I1 1504 aa35■■■■□ 3.19
NCBP2-211ENST00000468923 ABCC9O60706 1549 aa31.77■■■□□ 2.68
NCBP2-211ENST00000468923 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
NCBP2-211ENST00000468923 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
NCBP2-211ENST00000468923 RB1CC1Q8TDY2 1594 aa30.05■■■□□ 2.4
NCBP2-211ENST00000468923 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
NCBP2-211ENST00000468923 NACADO15069 1562 aa29.77■■■□□ 2.36
NCBP2-211ENST00000468923 PABPN1Q86U42 306 aaKnown RBP eCLIP29.62■■■□□ 2.33
NCBP2-211ENST00000468923 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
NCBP2-211ENST00000468923 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
NCBP2-211ENST00000468923 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
NCBP2-211ENST00000468923 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
NCBP2-211ENST00000468923 DCAF1Q9Y4B6 1507 aa28.97■■■□□ 2.23
NCBP2-211ENST00000468923 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
NCBP2-211ENST00000468923 CECR2Q9BXF3 1484 aa28.65■■■□□ 2.18
NCBP2-211ENST00000468923 CC2D2AQ9P2K1 1620 aa28.62■■■□□ 2.17
NCBP2-211ENST00000468923 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
NCBP2-211ENST00000468923 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
NCBP2-211ENST00000468923 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
NCBP2-211ENST00000468923 NCAPD3P42695 1498 aa27.51■■■□□ 2
NCBP2-211ENST00000468923 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
NCBP2-211ENST00000468923 CUX2O14529 1486 aa27.47■■□□□ 1.99
NCBP2-211ENST00000468923 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
NCBP2-211ENST00000468923 SMARCA2P51531 1590 aa27.26■■□□□ 1.96
NCBP2-211ENST00000468923 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
NCBP2-211ENST00000468923 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
NCBP2-211ENST00000468923 NESP48681 1621 aa27.17■■□□□ 1.94
NCBP2-211ENST00000468923 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
NCBP2-211ENST00000468923 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
NCBP2-211ENST00000468923 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
NCBP2-211ENST00000468923 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
NCBP2-211ENST00000468923 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
NCBP2-211ENST00000468923 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
NCBP2-211ENST00000468923 PDS5BQ9NTI5 1447 aa26.84■■□□□ 1.89
NCBP2-211ENST00000468923 WIZO95785 1651 aa26.75■■□□□ 1.87
NCBP2-211ENST00000468923 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
NCBP2-211ENST00000468923 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
NCBP2-211ENST00000468923 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
NCBP2-211ENST00000468923 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
NCBP2-211ENST00000468923 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
NCBP2-211ENST00000468923 WDR62O43379 1518 aa26.47■■□□□ 1.83
NCBP2-211ENST00000468923 TOP2AP11388 1531 aaKnown RBP26.47■■□□□ 1.83
NCBP2-211ENST00000468923 CEP164Q9UPV0 1460 aa26.42■■□□□ 1.82
NCBP2-211ENST00000468923 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
NCBP2-211ENST00000468923 OSCARQ8IYS5 282 aa26.32■■□□□ 1.8
NCBP2-211ENST00000468923 CFTRP13569 1480 aa26.28■■□□□ 1.8
NCBP2-211ENST00000468923 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
NCBP2-211ENST00000468923 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
NCBP2-211ENST00000468923 CCDC88BA6NC98 1476 aa26.1■■□□□ 1.77
NCBP2-211ENST00000468923 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
NCBP2-211ENST00000468923 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
NCBP2-211ENST00000468923 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
NCBP2-211ENST00000468923 RIMBP3CA6NJZ7 1639 aa25.84■■□□□ 1.73
NCBP2-211ENST00000468923 RIMBP3BA6NNM3 1639 aa25.84■■□□□ 1.73
NCBP2-211ENST00000468923 RIMBP3Q9UFD9 1639 aa25.84■■□□□ 1.73
NCBP2-211ENST00000468923 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
NCBP2-211ENST00000468923 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
NCBP2-211ENST00000468923 ARHGEF11O15085 1522 aa25.74■■□□□ 1.71
NCBP2-211ENST00000468923 CYB5RLQ6IPT4 315 aa25.74■■□□□ 1.71
NCBP2-211ENST00000468923 FBLN2P98095 1184 aa25.68■■□□□ 1.7
NCBP2-211ENST00000468923 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
NCBP2-211ENST00000468923 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.76e-6■□□□□ 8.5
NCBP2-211ENST00000468923 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
NCBP2-211ENST00000468923 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
NCBP2-211ENST00000468923 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
NCBP2-211ENST00000468923 CHD1O14646 1710 aa25.53■■□□□ 1.68
NCBP2-211ENST00000468923 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
NCBP2-211ENST00000468923 SOGA1O94964 1423 aa25.49■■□□□ 1.67
NCBP2-211ENST00000468923 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
NCBP2-211ENST00000468923 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
NCBP2-211ENST00000468923 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
NCBP2-211ENST00000468923 CHMP7Q8WUX9 453 aaPredicted RBP25.42■■□□□ 1.66
NCBP2-211ENST00000468923 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
NCBP2-211ENST00000468923 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
NCBP2-211ENST00000468923 CUX1P39880 1505 aa25.32■■□□□ 1.64
NCBP2-211ENST00000468923 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
NCBP2-211ENST00000468923 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
NCBP2-211ENST00000468923 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
NCBP2-211ENST00000468923 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
NCBP2-211ENST00000468923 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
NCBP2-211ENST00000468923 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
NCBP2-211ENST00000468923 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
NCBP2-211ENST00000468923 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
NCBP2-211ENST00000468923 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
NCBP2-211ENST00000468923 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
NCBP2-211ENST00000468923 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
NCBP2-211ENST00000468923 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
NCBP2-211ENST00000468923 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
NCBP2-211ENST00000468923 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
NCBP2-211ENST00000468923 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
NCBP2-211ENST00000468923 ERCC6L2Q5T890 1561 aa24.84■■□□□ 1.57
NCBP2-211ENST00000468923 NUP160Q12769 1436 aa24.81■■□□□ 1.56
NCBP2-211ENST00000468923 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
NCBP2-211ENST00000468923 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
NCBP2-211ENST00000468923 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
NCBP2-211ENST00000468923 JPH4Q96JJ6 628 aa24.71■■□□□ 1.55
NCBP2-211ENST00000468923 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
NCBP2-211ENST00000468923 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
NCBP2-211ENST00000468923 PRG4Q92954 1404 aaPredicted RBP24.68■■□□□ 1.54
NCBP2-211ENST00000468923 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms