RNA–Protein interactions for RNA: ENST00000479031.1

KRT19-206, Transcript of keratin 19, humanhuman

TSL 2

Gene KRT19, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT19-206ENST00000479031 NISCHQ9Y2I1 1504 aa35.9■■■■□ 3.34
KRT19-206ENST00000479031 ABCC9O60706 1549 aa32.12■■■□□ 2.73
KRT19-206ENST00000479031 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
KRT19-206ENST00000479031 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
KRT19-206ENST00000479031 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
KRT19-206ENST00000479031 NACADO15069 1562 aa30.45■■■□□ 2.46
KRT19-206ENST00000479031 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
KRT19-206ENST00000479031 MYO15BQ96JP2 1530 aa30.05■■■□□ 2.4
KRT19-206ENST00000479031 PABPN1Q86U42 306 aaKnown RBP eCLIP30.04■■■□□ 2.4
KRT19-206ENST00000479031 UNC13AQ9UPW8 1703 aa29.69■■■□□ 2.34
KRT19-206ENST00000479031 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
KRT19-206ENST00000479031 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
KRT19-206ENST00000479031 BICRAQ9NZM4 1560 aa29.58■■■□□ 2.33
KRT19-206ENST00000479031 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
KRT19-206ENST00000479031 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
KRT19-206ENST00000479031 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
KRT19-206ENST00000479031 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
KRT19-206ENST00000479031 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
KRT19-206ENST00000479031 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
KRT19-206ENST00000479031 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
KRT19-206ENST00000479031 SMARCA2P51531 1590 aa27.97■■■□□ 2.07
KRT19-206ENST00000479031 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
KRT19-206ENST00000479031 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
KRT19-206ENST00000479031 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
KRT19-206ENST00000479031 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
KRT19-206ENST00000479031 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
KRT19-206ENST00000479031 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
KRT19-206ENST00000479031 CUX2O14529 1486 aa27.7■■■□□ 2.02
KRT19-206ENST00000479031 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
KRT19-206ENST00000479031 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
KRT19-206ENST00000479031 NESP48681 1621 aa27.55■■■□□ 2
KRT19-206ENST00000479031 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
KRT19-206ENST00000479031 PDS5BQ9NTI5 1447 aa27.42■■□□□ 1.98
KRT19-206ENST00000479031 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
KRT19-206ENST00000479031 WIZO95785 1651 aa27.24■■□□□ 1.95
KRT19-206ENST00000479031 RSF1Q96T23 1441 aaPredicted RBP27.15■■□□□ 1.94
KRT19-206ENST00000479031 THOC2Q8NI27 1593 aaKnown RBP27.14■■□□□ 1.94
KRT19-206ENST00000479031 KIF21AQ7Z4S6 1674 aa27.11■■□□□ 1.93
KRT19-206ENST00000479031 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
KRT19-206ENST00000479031 CFTRP13569 1480 aa26.96■■□□□ 1.91
KRT19-206ENST00000479031 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
KRT19-206ENST00000479031 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
KRT19-206ENST00000479031 TOP2AP11388 1531 aaKnown RBP26.94■■□□□ 1.9
KRT19-206ENST00000479031 WDR62O43379 1518 aa26.9■■□□□ 1.9
KRT19-206ENST00000479031 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
KRT19-206ENST00000479031 OSCARQ8IYS5 282 aa26.69■■□□□ 1.86
KRT19-206ENST00000479031 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.85
KRT19-206ENST00000479031 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
KRT19-206ENST00000479031 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
KRT19-206ENST00000479031 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
KRT19-206ENST00000479031 IFT140Q96RY7 1462 aa26.47■■□□□ 1.83
KRT19-206ENST00000479031 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
KRT19-206ENST00000479031 ZNF608Q9ULD9 1512 aaPredicted RBP26.3■■□□□ 1.8
KRT19-206ENST00000479031 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
KRT19-206ENST00000479031 SUPT5HO00267 1087 aaKnown RBP26.19■■□□□ 1.78
KRT19-206ENST00000479031 FBLN2P98095 1184 aa26.18■■□□□ 1.78
KRT19-206ENST00000479031 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.78
KRT19-206ENST00000479031 SOGA1O94964 1423 aa26.17■■□□□ 1.78
KRT19-206ENST00000479031 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
KRT19-206ENST00000479031 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
KRT19-206ENST00000479031 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
KRT19-206ENST00000479031 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
KRT19-206ENST00000479031 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
KRT19-206ENST00000479031 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
KRT19-206ENST00000479031 CYB5RLQ6IPT4 315 aa26.01■■□□□ 1.75
KRT19-206ENST00000479031 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
KRT19-206ENST00000479031 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
KRT19-206ENST00000479031 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
KRT19-206ENST00000479031 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
KRT19-206ENST00000479031 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
KRT19-206ENST00000479031 CUX1P39880 1505 aa25.92■■□□□ 1.74
KRT19-206ENST00000479031 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
KRT19-206ENST00000479031 GRIN2BQ13224 1484 aa25.87■■□□□ 1.73
KRT19-206ENST00000479031 CHD1O14646 1710 aa25.86■■□□□ 1.73
KRT19-206ENST00000479031 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
KRT19-206ENST00000479031 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
KRT19-206ENST00000479031 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
KRT19-206ENST00000479031 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
KRT19-206ENST00000479031 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
KRT19-206ENST00000479031 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
KRT19-206ENST00000479031 SYNJ1O43426 1573 aa25.72■■□□□ 1.71
KRT19-206ENST00000479031 ABCA10Q8WWZ4 1543 aa25.72■■□□□ 1.71
KRT19-206ENST00000479031 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
KRT19-206ENST00000479031 CLASP1Q7Z460 1538 aa25.61■■□□□ 1.69
KRT19-206ENST00000479031 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
KRT19-206ENST00000479031 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
KRT19-206ENST00000479031 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
KRT19-206ENST00000479031 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
KRT19-206ENST00000479031 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
KRT19-206ENST00000479031 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
KRT19-206ENST00000479031 ERICH3Q5RHP9 1530 aa25.41■■□□□ 1.66
KRT19-206ENST00000479031 NUP160Q12769 1436 aa25.38■■□□□ 1.65
KRT19-206ENST00000479031 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
KRT19-206ENST00000479031 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
KRT19-206ENST00000479031 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
KRT19-206ENST00000479031 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
KRT19-206ENST00000479031 PRG4Q92954 1404 aaPredicted RBP25.22■■□□□ 1.63
KRT19-206ENST00000479031 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
KRT19-206ENST00000479031 IGF1RP08069 1367 aa25.2■■□□□ 1.63
KRT19-206ENST00000479031 ERCC6L2Q5T890 1561 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms