Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSMEM1Q8N8F7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 SPDYE13P-201ENST00000445314 798 ntBASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 LINC01238-205ENST00000567549 1107 ntBASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 BX276092.7-203ENST00000637198 1536 ntBASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LSMEM1Q8N8F7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 AC022616.7-201ENST00000525383 220 ntBASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 AC083849.1-201ENST00000615227 514 ntBASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LSMEM1Q8N8F7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 Z83836.1-201ENST00000624605 1642 ntBASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 RCN1P1-201ENST00000400413 996 ntBASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms