Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AC108860.2-201ENST00000562760 2183 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AL109659.2-201ENST00000606809 1674 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 HLA-A-201ENST00000376802 1334 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 FAM220CP-201ENST00000395253 831 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 MIR1233-2-201ENST00000408138 82 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 MIR1233-1-201ENST00000408722 82 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 TSPY22P-201ENST00000427496 604 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AC092183.1-201ENST00000469884 875 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AC017007.3-201ENST00000479865 435 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AC092865.5-201ENST00000545435 363 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 TPSP2-201ENST00000561760 610 ntBASIC14.53□□□□□ -0.08
TREML4Q6UXN2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TREML4Q6UXN2 AC099398.1-201ENST00000567919 2776 ntBASIC14.52□□□□□ -0.08
TREML4Q6UXN2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 PCDHA12-202ENST00000613593 2588 ntBASIC14.52□□□□□ -0.08
TREML4Q6UXN2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREML4Q6UXN2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 AF228730.7-201ENST00000641842 219 ntBASIC14.52□□□□□ -0.09
TREML4Q6UXN2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 PHGDH-209ENST00000641074 1780 ntBASIC14.52□□□□□ -0.09
TREML4Q6UXN2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TREML4Q6UXN2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.51□□□□□ -0.09
TREML4Q6UXN2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms