Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 SIRPAP1-201ENST00000448467 1770 ntBASIC20.55■□□□□ 0.88
CALM3P0DP25 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CALM3P0DP25 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.55■□□□□ 0.88
CALM3P0DP25 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.55■□□□□ 0.88
CALM3P0DP25 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.55■□□□□ 0.88
CALM3P0DP25 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.55■□□□□ 0.88
CALM3P0DP25 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.55■□□□□ 0.88
CALM3P0DP25 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.55■□□□□ 0.88
CALM3P0DP25 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.55■□□□□ 0.88
CALM3P0DP25 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CALM3P0DP25 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 HTR7P1-202ENST00000624664 4411 ntBASIC20.55■□□□□ 0.88
CALM3P0DP25 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CALM3P0DP25 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.55■□□□□ 0.88
CALM3P0DP25 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALM3P0DP25 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.54■□□□□ 0.88
CALM3P0DP25 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.54■□□□□ 0.88
CALM3P0DP25 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.54■□□□□ 0.88
CALM3P0DP25 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.54■□□□□ 0.88
CALM3P0DP25 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CALM3P0DP25 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.54■□□□□ 0.88
CALM3P0DP25 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.54■□□□□ 0.88
CALM3P0DP25 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.54■□□□□ 0.88
CALM3P0DP25 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.54■□□□□ 0.88
CALM3P0DP25 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.54■□□□□ 0.88
CALM3P0DP25 AC109462.3-201ENST00000573934 613 ntBASIC20.54■□□□□ 0.88
CALM3P0DP25 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.54■□□□□ 0.88
CALM3P0DP25 LINC01711-201ENST00000598340 967 ntBASIC20.54■□□□□ 0.88
CALM3P0DP25 AD001527.2-201ENST00000622994 785 ntBASIC20.54■□□□□ 0.88
CALM3P0DP25 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 AL353593.2-201ENST00000602529 1483 ntBASIC20.54■□□□□ 0.88
CALM3P0DP25 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALM3P0DP25 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CALM3P0DP25 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CALM3P0DP25 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
CALM3P0DP25 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CALM3P0DP25 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.53■□□□□ 0.88
CALM3P0DP25 AC067852.2-201ENST00000590513 2313 ntBASIC20.53■□□□□ 0.88
CALM3P0DP25 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.53■□□□□ 0.88
CALM3P0DP25 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.53■□□□□ 0.88
CALM3P0DP25 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.53■□□□□ 0.88
CALM3P0DP25 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 AC012313.10-201ENST00000623509 926 ntBASIC20.53■□□□□ 0.88
CALM3P0DP25 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CALM3P0DP25 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.53■□□□□ 0.88
CALM3P0DP25 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.53■□□□□ 0.88
CALM3P0DP25 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALM3P0DP25 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CALM3P0DP25 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.53■□□□□ 0.88
CALM3P0DP25 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALM3P0DP25 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALM3P0DP25 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CALM3P0DP25 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.52■□□□□ 0.88
CALM3P0DP25 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 ABCD1P5-201ENST00000445663 754 ntBASIC20.52■□□□□ 0.88
CALM3P0DP25 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALM3P0DP25 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.52■□□□□ 0.88
CALM3P0DP25 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CALM3P0DP25 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms