Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.94□□□□□ -0.5
SNCGO76070 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.94□□□□□ -0.5
SNCGO76070 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.94□□□□□ -0.5
SNCGO76070 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC11.94□□□□□ -0.5
SNCGO76070 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC11.94□□□□□ -0.5
SNCGO76070 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SNCGO76070 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SNCGO76070 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC11.94□□□□□ -0.5
SNCGO76070 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC11.94□□□□□ -0.5
SNCGO76070 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC11.94□□□□□ -0.5
SNCGO76070 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC11.94□□□□□ -0.5
SNCGO76070 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC11.94□□□□□ -0.5
SNCGO76070 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.94□□□□□ -0.5
SNCGO76070 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
SNCGO76070 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SNCGO76070 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SNCGO76070 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SNCGO76070 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC11.94□□□□□ -0.5
SNCGO76070 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNCGO76070 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
SNCGO76070 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SNCGO76070 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC11.93□□□□□ -0.5
SNCGO76070 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC11.93□□□□□ -0.5
SNCGO76070 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SNCGO76070 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC11.93□□□□□ -0.5
SNCGO76070 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 AC135279.3-201ENST00000610945 1311 ntBASIC11.93□□□□□ -0.5
SNCGO76070 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SNCGO76070 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SNCGO76070 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
SNCGO76070 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNCGO76070 UNC93B3-201ENST00000308076 687 ntBASIC11.93□□□□□ -0.5
SNCGO76070 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC11.93□□□□□ -0.5
SNCGO76070 TESC-206ENST00000541210 936 ntTSL 3 BASIC11.93□□□□□ -0.5
SNCGO76070 AL162412.1-201ENST00000567129 965 ntBASIC11.93□□□□□ -0.5
SNCGO76070 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
SNCGO76070 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC11.93□□□□□ -0.5
SNCGO76070 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC11.93□□□□□ -0.5
SNCGO76070 AC100791.3-201ENST00000617619 330 ntBASIC11.93□□□□□ -0.5
SNCGO76070 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC11.93□□□□□ -0.5
SNCGO76070 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms