Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 ELK2BP-201ENST00000415014 1224 ntBASIC18.63■□□□□ 0.57
SYN3O14994 KRT18P3-201ENST00000451602 1288 ntBASIC18.63■□□□□ 0.57
SYN3O14994 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN3O14994 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.63■□□□□ 0.57
SYN3O14994 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SYN3O14994 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYN3O14994 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN3O14994 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SYN3O14994 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.63■□□□□ 0.57
SYN3O14994 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
SYN3O14994 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SYN3O14994 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.62■□□□□ 0.57
SYN3O14994 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SYN3O14994 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.62■□□□□ 0.57
SYN3O14994 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SYN3O14994 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 AC006504.4-201ENST00000592118 1568 ntBASIC18.62■□□□□ 0.57
SYN3O14994 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.62■□□□□ 0.57
SYN3O14994 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.62■□□□□ 0.57
SYN3O14994 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYN3O14994 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN3O14994 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYN3O14994 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.62■□□□□ 0.57
SYN3O14994 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SYN3O14994 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.61■□□□□ 0.57
SYN3O14994 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.61■□□□□ 0.57
SYN3O14994 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.61■□□□□ 0.57
SYN3O14994 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SYN3O14994 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.61■□□□□ 0.57
SYN3O14994 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SYN3O14994 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 BX842568.4-201ENST00000421222 227 ntBASIC18.61■□□□□ 0.57
SYN3O14994 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.61■□□□□ 0.57
SYN3O14994 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.61■□□□□ 0.57
SYN3O14994 AC108751.1-201ENST00000490852 363 ntBASIC18.61■□□□□ 0.57
SYN3O14994 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SYN3O14994 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.61■□□□□ 0.57
SYN3O14994 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.61■□□□□ 0.57
SYN3O14994 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SYN3O14994 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.61■□□□□ 0.57
SYN3O14994 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
SYN3O14994 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYN3O14994 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SYN3O14994 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.6■□□□□ 0.57
SYN3O14994 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SYN3O14994 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.6■□□□□ 0.57
SYN3O14994 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SYN3O14994 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.6■□□□□ 0.57
SYN3O14994 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.6■□□□□ 0.57
SYN3O14994 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.6■□□□□ 0.57
SYN3O14994 RNA5SP416-201ENST00000516838 111 ntBASIC18.6■□□□□ 0.57
SYN3O14994 AC092865.5-201ENST00000545435 363 ntBASIC18.6■□□□□ 0.57
SYN3O14994 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.6■□□□□ 0.57
SYN3O14994 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.6■□□□□ 0.57
SYN3O14994 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYN3O14994 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms