Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SRRM4A7MD48 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.27□□□□□ -0.12
SRRM4A7MD48 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.27□□□□□ -0.12
SRRM4A7MD48 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SRRM4A7MD48 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.27□□□□□ -0.12
SRRM4A7MD48 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRRM4A7MD48 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 AC083849.1-201ENST00000615227 514 ntBASIC14.27□□□□□ -0.13
SRRM4A7MD48 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.27□□□□□ -0.13
SRRM4A7MD48 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SRRM4A7MD48 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRRM4A7MD48 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 DUX4L26-201ENST00000489078 1255 ntBASIC14.26□□□□□ -0.13
SRRM4A7MD48 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.26□□□□□ -0.13
SRRM4A7MD48 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.26□□□□□ -0.13
SRRM4A7MD48 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 AP001094.4-201ENST00000579008 2176 ntBASIC14.26□□□□□ -0.13
SRRM4A7MD48 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRRM4A7MD48 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms