Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf40Q86WS4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf40Q86WS4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf40Q86WS4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf40Q86WS4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf40Q86WS4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.97■□□□□ 0.47
C12orf40Q86WS4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 AC138932.1-201ENST00000534164 6830 ntBASIC17.96■□□□□ 0.47
C12orf40Q86WS4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 YBX2P1-201ENST00000394192 760 ntBASIC17.96■□□□□ 0.47
C12orf40Q86WS4 AC005104.2-201ENST00000427818 678 ntBASIC17.96■□□□□ 0.47
C12orf40Q86WS4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 AC064836.3-201ENST00000607928 673 ntBASIC17.96■□□□□ 0.47
C12orf40Q86WS4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf40Q86WS4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.96■□□□□ 0.46
C12orf40Q86WS4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
C12orf40Q86WS4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
C12orf40Q86WS4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 AC003669.1-201ENST00000334569 611 ntBASIC17.95■□□□□ 0.46
C12orf40Q86WS4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 AC023274.1-201ENST00000418278 595 ntBASIC17.95■□□□□ 0.46
C12orf40Q86WS4 RNA5SP416-201ENST00000516838 111 ntBASIC17.95■□□□□ 0.46
C12orf40Q86WS4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf40Q86WS4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf40Q86WS4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
C12orf40Q86WS4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf40Q86WS4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
C12orf40Q86WS4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.94■□□□□ 0.46
C12orf40Q86WS4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf40Q86WS4 BX276092.7-203ENST00000637198 1536 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms